Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0770 ATGATGGGTTGTGTTTGTGGCAAGCCCTCAGCCATTGATGACAGTAGGGAGAGTCCAAGGGAGCGATTATCGAATAAGGCTTCATTGGACTCACGTGGATCTAGGGCTACCTCATCGAGGAGGGAGGATGGATATCGAGTGAAGGATAGATATGATAATAATGATGGTAGAATTGCATCCATGGATAAACAAGGAAATGGCTCCGTTCGTTTACAAGTCGATAATTCTGAAAGGAAGAGGGAGAAAACAGAGTATGTTGTTGCGCAGCATCCTGGAATTGTTAGCGTTCCAAAAGCCACAGAAGGGGAGCAGGTCGCAGCTGGGTGGCCTTCATGGTTGGCAGCAGTGGCTGGAGAGGCTATCGAGGGATGGTTGCCACGACGGGCAGATTCTTTTGAGAAGTTGGATAAAATTGGTCAAGGAACTTATAGCAATGTTTATAGGGCTCGTGATCTTGAACATAAGAAAATTGTTGCTTTGAAAAAAGTGAGGTTCGATAATCTTGAACCTGAGAGTGTTCGTTTCATGGCAAGGGAAATTCACATTCTTCGTAGGCTTGATCATCCAAACGTTATAAAACTGGAAGGTCTAGTTACATCAAGGATGTCTTGCAGCCTATACCTTGTTTTTGAGTACATGGAACATGACTTGGCTGGGCTTGCTTCACATCCTGGACTGAAGTTTACAGAAGCACAGGTCAAATGTTATATGCAGCAACTTTTACGTGGACTTGATCACTGCCACAGCTGTGGTGTACTGCACCGTGACATTAAAGGATCCAACCTTCTGATTGACAACAATGGAATCTTGAAGATTGCAGACTTTGGTTTGGCAAGATTTTATAATCCCAATCAAATTCAGCCGTTGACTAGCCGAGTTGTCACGCTTTGGTATCGCCCTCCGGAGCTTTTGCTTGGAGCAACTTACTATGGCGCTGCAGTAGATTTATGGAGTACAGGCTGCATACTTGCTGAGCTGTATGCTGGAATGCCTATTATGCCAGGAAGAACTGAGGTTGAACAGTTACACAAAATTTTTAAACTTTGTGGCTCGCCTTCTGAGGATTATTGGAGGAAATCGAAGCTACCTCATGCAACAATATTTAAGCCCCAACAACCCTACAGGCGGTGTGTTACAGACACATTTAAGGAGTTTCCTGCACCTGCATTAGCACTGATGGAAACACTTTTATCCATAGATCCTGCTGATCGTGGAACAGCAGCATCTGCTTTGAAGAGTGAGTTCTTCACAACAAAACCATTACCTTGTGATCCTTCAAGTTTGCCCAAGTATCCTCCAAGCAAGGAATTTGATGCCAAAGCACGGGATGAAGAAGCTAGAAGACAAGGAGCTCTCGGAAGCAAGGGCCATAGACAAGGGACAAGAGAGTCGCGGGCTGTCCCTGCACCTGATGCTAATGCTGAACTGGTCCTATCCATGCAGAAGAGACAAGGTCAATTCAACTCTAAGAGCCGTAGTGAGAAGTTTAACCCTCATCCTGAAGAAGTTGCTTCAGGATTTCCCATTGATCCCCCTAGGCCATCACAGGCTGTGGAAGTAGGTATAGATCACCAGGTACAGCAACATAAAAGAGCTTCCCATTCAGGTCCACTTTGTAACCGCACTGCATGGACGAAAACTGGGAAAAACCCGGATGATGGCCCGAAGGTCTCTAATGGGGGTGACTTGTCAGCAATGTCCGGCTTAGTCGCAGCAAGAAGGAGCATGTTATCGGATGATCGCAGAGAAAGGTCTGGATCATCACACGCTGAGGTTCCAAAACTAATAAGCCGGTTCCCAGGATCCTTGAAGGAGGCCTCTGAATCATTGATGCAACATGAACAGAAGCATGCTGGAGCTCCTCCTCCAAAGGAAGAAGGGAGAGGCAGCAACAAAGACCCAATTCCTGTTGGTTATGGGTCAAAGGGCCATAAAATCCATTATTCTGGTCCATTGTTAGTTCCATCCAGCAACACGGATCAGATGTTGAAGGACCACGATCGCCAGATTCAAGAAGTTGTCAGAAGAGCGCGATTGGACAAGGCGAAGATGAGAAGACTTCAGGCTGAAGGGAACAACCAGATAACCACCAATTCATTATTTGTTTCTGGTCGCTGA 2118 0.4599 MMGCVCGKPSAIDDSRESPRERLSNKASLDSRGSRATSSRREDGYRVKDRYDNNDGRIASMDKQGNGSVRLQVDNSERKREKTEYVVAQHPGIVSVPKATEGEQVAAGWPSWLAAVAGEAIEGWLPRRADSFEKLDKIGQGTYSNVYRARDLEHKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHPNVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFTEAQVKCYMQQLLRGLDHCHSCGVLHRDIKGSNLLIDNNGILKIADFGLARFYNPNQIQPLTSRVVTLWYRPPELLLGATYYGAAVDLWSTGCILAELYAGMPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKPQQPYRRCVTDTFKEFPAPALALMETLLSIDPADRGTAASALKSEFFTTKPLPCDPSSLPKYPPSKEFDAKARDEEARRQGALGSKGHRQGTRESRAVPAPDANAELVLSMQKRQGQFNSKSRSEKFNPHPEEVASGFPIDPPRPSQAVEVGIDHQVQQHKRASHSGPLCNRTAWTKTGKNPDDGPKVSNGGDLSAMSGLVAARRSMLSDDRRERSGSSHAEVPKLISRFPGSLKEASESLMQHEQKHAGAPPPKEEGRGSNKDPIPVGYGSKGHKIHYSGPLLVPSSNTDQMLKDHDRQIQEVVRRARLDKAKMRRLQAEGNNQITTNSLFVSGR 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0770 705 MobiDBLite consensus disorder prediction 487 509 - -
Lele31g0770 705 FunFam probable serine/threonine-protein kinase At1g54610 119 214 - -
Lele31g0770 705 MobiDBLite consensus disorder prediction 13 28 - -
Lele31g0770 705 MobiDBLite consensus disorder prediction 528 643 - -
Lele31g0770 705 Pfam Protein kinase domain 132 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0770 705 SUPERFAMILY Protein kinase-like (PK-like) 126 424 IPR011009 -
Lele31g0770 705 MobiDBLite consensus disorder prediction 575 589 - -
Lele31g0770 705 PANTHER CELL DIVISION PROTEIN KINASE 130 422 - -
Lele31g0770 705 MobiDBLite consensus disorder prediction 1 66 - -
Lele31g0770 705 ProSiteProfiles Protein kinase domain profile. 132 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0770 705 MobiDBLite consensus disorder prediction 435 464 - -
Lele31g0770 705 Coils Coil 670 690 - -
Lele31g0770 705 Gene3D Transferase(Phosphotransferase) domain 1 215 454 - -
Lele31g0770 705 SMART serkin_6 132 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0770 705 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Lele31g0770 705 MobiDBLite consensus disorder prediction 531 547 - -
Lele31g0770 705 ProSitePatterns Protein kinases ATP-binding region signature. 138 161 IPR017441 GO:0005524
Lele31g0770 705 MobiDBLite consensus disorder prediction 422 472 - -
Lele31g0770 705 Gene3D Phosphorylase Kinase; domain 1 119 214 - -
Lele31g0770 705 FunFam probable serine/threonine-protein kinase At1g54610 215 456 - -
Lele31g0770 705 MobiDBLite consensus disorder prediction 35 57 - -
Lele31g0770 705 CDD STKc_CDK9_like 132 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0770 Lele-ChrLele31 15404383 15409841 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0770 124 448 Core Cell Cycle Gene Families AT5G10270 54.252 1.70e-119 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Lele31g0770 Pkinase 2e-68 CL0016