Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0740 ATGGGTAGGCCACCCGGTAATGGAGGCCCTGCCTTCCGCTTTACTCAAGCTGAGGTTGCAGAAATGGAAGCAATTTTGCAAGAGCATAATAACGCTATGCCAGCACGTGATGTTCTCACAGCTCTAGCAGAGAAGTTCAGTGAATCTCCTGACCGTAAAGGAAAGATTACTGTGCAGATGAAGCAAGTTTGGAACTGGTTTCAAAATAAACGGTATGCTATAAGGGCAAGATCTAGTAAGGCTCCTGGAAAGTTAAGTATCACTCCTATGGTTCGAGATGACTCGACCCCAGTTAGAAATATGCCTCAACCAATGGCTGCTCCTATACCTCCTGCTTCAGTTTCAACAGGAAAAGGTGCTCCGGAAAACTCAGCAATGGAGTTTGAAGCTAAGTCTGGAAGGGATGGAGCATGGTACGATGTTGCAAACTTCCTATCCCACAGGCATTTAGAAACCAGTGATCCGGAAGCTCTGGTCCGATTTGCTGGTTTTGGACCTGAGGAAGATGAGTGGATTAATGTGCGAAAAAATATCCGGCCACGTTCTCTGCCATGTGAATCATCAGAATGTGTGGCAGTTCTCCCTGGGGACCTCATACTGTGTTTTCAGGAAGGTAAGGAGCAGGCTCTCTACTTTGATGCTCACGTCCTTGATGCTCAAAGACGGAGGCATGATGTTAGAGGCTGTCGTTGTAGATTTCTGGTTCGTTACGATCATGATCAATCAGAGGAAATTGTTCCGCTTAGGAAGGTTTGTCGTAGGCCTGAGACTGATTACAGGTTACAACAACTTCATGCTGTGAACGAGGCAACGCCAGTGGACCAGCAAAGGACCGGCATGGACTTAACGCCTGTGCACGCTGTTAGGGTTGCAAGCTCAGCTGAAACAGTGCCAAAACAGCAGGGCGCAAACAATGCCATTGCCCCGCAAGTTTTGCAAGCTACTGTTGCTTTAACCCCACAAACTGTGAATGTAGATCAGAGAAAAGCTGAAGTAGCCAATGATATGACCGGAGGAAACGCTGTCATCCGCCCTGGCGGTACTGTGTTTACCACTGGTGTCATTACCAGCAGCGTTCCCCCCAGTGGTACGGCATTTCCTGGCAATGTTACGATCAGTGGTGGTACTGCGTTTCCCAGCAATGTTGTTACAAGCAGTGTTCCAGTAGGTTCAAATCCGAATCTGGCTGAAGGAAAATGA 1200 0.4792 MGRPPGNGGPAFRFTQAEVAEMEAILQEHNNAMPARDVLTALAEKFSESPDRKGKITVQMKQVWNWFQNKRYAIRARSSKAPGKLSITPMVRDDSTPVRNMPQPMAAPIPPASVSTGKGAPENSAMEFEAKSGRDGAWYDVANFLSHRHLETSDPEALVRFAGFGPEEDEWINVRKNIRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDAQRRRHDVRGCRCRFLVRYDHDQSEEIVPLRKVCRRPETDYRLQQLHAVNEATPVDQQRTGMDLTPVHAVRVASSAETVPKQQGANNAIAPQVLQATVALTPQTVNVDQRKAEVANDMTGGNAVIRPGGTVFTTGVITSSVPPSGTAFPGNVTISGGTAFPSNVVTSSVPVGSNPNLAEGK 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0740 399 Pfam SAWADEE domain 125 252 IPR032001 GO:0003682
Lele31g0740 399 CDD homeodomain 13 75 IPR001356 GO:0003677
Lele31g0740 399 ProSiteProfiles 'Homeobox' domain profile. 13 77 IPR001356 GO:0003677
Lele31g0740 399 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 1 331 IPR039276 -
Lele31g0740 399 Gene3D - 10 84 - -
Lele31g0740 399 Gene3D - 123 184 - -
Lele31g0740 399 SUPERFAMILY Homeodomain-like 4 79 IPR009057 -
Lele31g0740 399 SMART HOX_1 7 81 IPR001356 GO:0003677
Lele31g0740 399 Gene3D - 185 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0740 Lele-ChrLele31 15154900 15160356 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Lele31g0740 SAWADEE 5.8e-40 CL0049