Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0739 ATGGTTGCAGTATTTTCTATTTGGTTTTTAACATTTTTTAGTCTGATTGATTTTATTCACCTTGTAAAACAGAAATCAGCACATTCTGACCGCATATATGAGATGACTGATTCAGATATGGACCAACAAAGGCATGGGAATTCTAATTCTGAACCTTCTATCCTTGTGAGTAGTGACAACATTTTGCAGCCAAATATCCTCACAGTGCCAGCAGCTTCAGGGAACACGAGTAATCTTGATTCCCACTATTTACCAGATGTCTATGACAATGCAGTAATGTATAGAGGGACACAATACAATGCCATTCAAAATCAACGCAATCTTGATATGAGCGTTGCAGCTGTGACTAACTTGCATTATTCTGGCATGAATGCTTCTTCTAGTGCTGCTGTATTACATCTCCCTACTAATCACAGAGCCTATGATCAGTTGCCAGCATCAAGCACATTTGCTGTGTCTGGAGCTTCTTCAGATAATTTCGGAAGGAGTGGCATTTATGTAGATGACGTCAGAGCTTCATTCAAAAGAAAAAATGCTGAAGCTGTTAGAGGCAATTTACCACATTGTGATGCCTCACCTAGTTCTTCAGTAAATCCCCCAAATGCAAGGCACTCTGATGGGGTTACTATGATGGATACTGCTTCCTTGCCCCTGCCTCTATTCCGAGGAAATAACATCCCTTCACCCATGGAATTAGGTCCCCATGGTAGTTTGTGGAGCAGGTCAGATGAGCCTGTTATGGTGCATGAACATAGCCATTTGATTCAAGGTAATTATTTAGGACAGCCCTTCCAGCCAGTTGCTCCTCCTTGGTTGGATCAACAGTTGAATAATAGTCACAGTGATGGACATACTACAGCTTGGAACCAGTCTCTTCCAATGCCTTATATGCAAGCACCCAATGTTAATGGAAGTTCATTAGAGAATGCAAATATGGGTTTGCAGAGATATCATGATACGGCTAGTAGCATAAATGGCCTCAGGTTTGTTCATCCACCTGTCAGCCGCCAGCACCATAATTATCATCATCCAGCAATGCCAATGAGAGGATTCAGAGGCCACAATATCATTTTTCAACCTCCAGTAACTGCAGCTTCTTATAGAGTTCCAACAAATCCTTTACGCAATGCCGTGATCCCTGCACAGAATGGTTTTGAGATGGGTCATAGGCATGTTGGCCTTGTACCACCGGCAGGCCTACAGGTATATCGTCCTCATAGAGGATACATGAATGAGACAACAATTGGGCATCGGAATCTTCACCCGATGAGCTATCTCCAAGTTGATGATGTTGCAATACTGGATGAAGCGGGATTAGTTGATCATCACAGAGATATGCGCTTGGACATAGAGGATATGTCTTATGAGGAGCTTCTTGCATTGGGCGAGCGAATTGGCAATGTAAGCACCGGTTTATCAGAAGAGTCCATTTCAGCTTTAATGAAAACTAGAATTTATGCAACACCCACTATTATTAACCTGGAAGAGGAAGAAGAAACTTCAGAGGATCAGGAAGCTGATTCATGCATAATATGCCTGGATAAATATGAGAGCAGACAGAAGATAGGAATTCTTCAATGCGGTCATGAGTATCATGCAGATTGCTTGAAGAAATGGCTTCTTGTGAAAAATGTCTGTCCCATATGCAAATCAGAAGCATTGACTCCTGGAAAGGACAAAGGAGCATAG 1689 0.421 MVAVFSIWFLTFFSLIDFIHLVKQKSAHSDRIYEMTDSDMDQQRHGNSNSEPSILVSSDNILQPNILTVPAASGNTSNLDSHYLPDVYDNAVMYRGTQYNAIQNQRNLDMSVAAVTNLHYSGMNASSSAAVLHLPTNHRAYDQLPASSTFAVSGASSDNFGRSGIYVDDVRASFKRKNAEAVRGNLPHCDASPSSSVNPPNARHSDGVTMMDTASLPLPLFRGNNIPSPMELGPHGSLWSRSDEPVMVHEHSHLIQGNYLGQPFQPVAPPWLDQQLNNSHSDGHTTAWNQSLPMPYMQAPNVNGSSLENANMGLQRYHDTASSINGLRFVHPPVSRQHHNYHHPAMPMRGFRGHNIIFQPPVTAASYRVPTNPLRNAVIPAQNGFEMGHRHVGLVPPAGLQVYRPHRGYMNETTIGHRNLHPMSYLQVDDVAILDEAGLVDHHRDMRLDIEDMSYEELLALGERIGNVSTGLSEESISALMKTRIYATPTIINLEEEEETSEDQEADSCIICLDKYESRQKIGILQCGHEYHADCLKKWLLVKNVCPICKSEALTPGKDKGA 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0739 562 Pfam Ring finger domain 507 550 IPR001841 -
Lele31g0739 562 ProSiteProfiles Zinc finger RING-type profile. 509 550 IPR001841 -
Lele31g0739 562 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 107 554 IPR045191 GO:0061630
Lele31g0739 562 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 467 554 IPR013083 -
Lele31g0739 562 SMART ring_2 509 549 IPR001841 -
Lele31g0739 562 SUPERFAMILY RING/U-box 508 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0739 Lele-ChrLele31 15146816 15149132 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0739 419 554 C3H Transcription Factor Family AT2G15530 46.377 3.66e-35 139