Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0730 ATGGCAGGTACTTTTCGTTGCCTCACCACAAGAAATCTCAGGTTTCACACTCTTGACGGTTGCACGGCGCACGAGAATACCACCACACTTGCTTCTTCTTCTTCTGCAACTGTAAAAAGCAGTCACCGTCATCGTCGTCATCTTCCACAGAATAACAACTTCAAAAGCTGGAACACCAAAAGTACCACAAGGAATGTAGAGCAAGAACACGACGACGACGATTCTCCGGTTTCTCCGTCTCCGAAAGACCCAGCTCTCCGTTTCCATCTTCAATATCTGCAACAAAACCACTCTTATGCAGGTTTAGACACAGAGCATAGCTCTCTTCATAATCCCAAGAAGCGGTCGTATCTCCTTCCTCCTCCGCTTTCGCCTTCTTCTTCTCCTCCTCTTGTTACTGCTACCGTCGAATATGCAACAAAGATGGGAGAGAGTGCCAATCATCAGCAGCGACCGGTAACGACGTCTTCGAGATTGGCGGCGATGAGGGGTGGAGTGGGGGAGATCGTGGAGGTTCAAGGAGGCCATATTGTTCGCTCCACCGGGCGCAAAGACCGTCATAGTAAGGTGTGTACCGCTAAAGGACCTAGAGATCGGCGAGTTCGTCTCTCCGCTCATACCGCCATTCAATTCTACGACGTCCAAGACCGCCTCGGCTACGACCGCCCCAGCAAAGCCGTCGATTGGCTCATTAAGAATGCCAAAACTGCCATAGATGAGCTTGCTAAGCTTCCGGCATGGAAACCCAATACGGTAAATCAAAATGCCCAGCAAGAGCAGGAGAGAGAGCAGAATCAGCTGGGGAACGAGAATGTAAACGAGGACGAAAGCCCGATTGGAGTTCACCGTGCGGTGGCAGCGGATGCTATGGCTTCTGGTAGCCGGGAAACAAGTACGCCGGCGGGAAGCGGCGGTCGGATTTTGGAGCAATTGGGTGAAAACCCTAACCGTGGTGGGTCGGGTTTTCTGTCGCCGACGTTGGGCATTGACATTGCTGACTCCATCAAGTCTTTCTTCCCGATTGGTGTGACGGCGGCGCAAGAGACGAATTCTTCGTCGATTCAGTTTCAGAATTACCCACCAGATTTGCTTTCGCGAACTAGTAGCGCCTGCCAGAACCAAGATCTACGGCTCTCGCTCCAGTCCTTCCAGGACCCGATTCTGCTTCACCATGCTCGAACTCAGACTCAGCACCACCATCAACATCAACAGAACGAGCAATTTTTCTCTGCAACAACCCCATTAGGGTTCGATGGGGCTTCTTTCCCAGAGGAACATGGTAGATTGCATAGAATGGTAGCTTGGAATGGTGATGCTGCTGATGCTAGTAATAGTGGCCACGGCGGAGGAGGAGGGGACCCCTTCAGTCCAGTAACAATCCTTCGATTCGTGCTTGGATAG 1401 0.5161 MAGTFRCLTTRNLRFHTLDGCTAHENTTTLASSSSATVKSSHRHRRHLPQNNNFKSWNTKSTTRNVEQEHDDDDSPVSPSPKDPALRFHLQYLQQNHSYAGLDTEHSSLHNPKKRSYLLPPPLSPSSSPPLVTATVEYATKMGESANHQQRPVTTSSRLAAMRGGVGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKNAKTAIDELAKLPAWKPNTVNQNAQQEQEREQNQLGNENVNEDESPIGVHRAVAADAMASGSRETSTPAGSGGRILEQLGENPNRGGSGFLSPTLGIDIADSIKSFFPIGVTAAQETNSSSIQFQNYPPDLLSRTSSACQNQDLRLSLQSFQDPILLHHARTQTQHHHQHQQNEQFFSATTPLGFDGASFPEEHGRLHRMVAWNGDAADASNSGHGGGGGDPFSPVTILRFVLG 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0730 466 MobiDBLite consensus disorder prediction 29 84 - -
Lele31g0730 466 MobiDBLite consensus disorder prediction 252 275 - -
Lele31g0730 466 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 149 422 IPR005333 GO:0003700
Lele31g0730 466 MobiDBLite consensus disorder prediction 64 78 - -
Lele31g0730 466 Coils Coil 253 273 - -
Lele31g0730 466 MobiDBLite consensus disorder prediction 103 129 - -
Lele31g0730 466 ProSiteProfiles TCP domain profile. 183 241 IPR017887 -
Lele31g0730 466 MobiDBLite consensus disorder prediction 252 273 - -
Lele31g0730 466 Pfam TCP family transcription factor 182 268 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0730 Lele-ChrLele31 15074303 15075874 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0730 161 436 TCP Transcription Factor Family AT3G15030 50.526 1.88e-73 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lele31g0730 TCP 1.8e-32 No_clan