Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0712 ATGCATCGTGTTGGTTTTCGCCAAGATGACTGCAGTTTTGTCTGTGCAATAATTGCAAGCTCTAATTTATCATGCCCCTCTAACGGAAAACAAATTCATGCATTGTCAATAAAATCTGACATCCCTTCTAATCGTATTTCTGTGAATAATGCTCTTGTTGCAATGTACTCTAAATGTGGGATTCTTCAAGACGCAAGAAGGTTATTTGATCGGATGCTAGAACATAATGTAGTAACATTAAATTCAATGATAGCAGGTTATTCACAACACAGTGTCGAGGTAGAATCACTGCATCTTTTTGAACTGATGCTGCAAAAGAATATTGCCTCTACTAGCATAACCTTCATATCCATTCTTTCTGCGTGTGCACACACTGGAAAAGTTGAGGAAGGTAAAAAATATTGTAATATGATGAAAGAGAAGTTTGGGATTGAATCAGAAGCAGAGCATTTTTCCTGCATGATAGATCTTCTTGGCCGAGCTAGAAAACTAAGTGAAGCTGAGAGGATTATGGAGACAATGCCATTTAGTCCTGGTTCTGTGGAATGGGGTGCTTTACTATGTGCCTGTAGAAAGCAGATGGGAGAGGCTGCAAGTATTAAAAGGTTGATGCGGGATGTGAAAAAGAAACCAGGTTGTAGTTGGATTGAGCTGGATAAGAGGGTGCACAAGATAAAGGGATCAGGATATGTGTCAGAGGTGAGATGGGCATTGGTGAAAGATGAAGAGAACGGGGTAGAAGAGAAAGAAAGAAGGTTGATGCATCACAGTGAGAAGCTGGCAGTCGCATTTGGGCTAATTGCAACCAGAGAAGGGACTCCAATACTTGTTGTGAAGAATTTGAGAATTTGTGGTGATTGCCACAACGCCATTAAATTTATTTCTGCTGTTACCCATAGAGAAATCACTGTTAGAGATGCTTACAGAATTCAAGTGGATGCTGTAATCTGTTGTCTGTCTTGTCAGAATGGAAGATGCATCCCGATCTTGACTGCAAATCCTATGGAAACTGGGGTTAAGAATCCCATGACTTCAGAAAAAGTGCAACAGATTGACCTAGGTAAGTTGGTGTGTGCAGAAATGGTGGATATCATGAAAAAGCTGGCCAAGCAGGACGTTGAGTTGACTGTGGAAGAGAGAAATTTATTCTCTGTTGGGTACAAAAATGTAGTTGGAGCCAGGAGGACATCATGGAGGATCTTGTCATCGATAGTACCGAATGAAGAATCAAAAGGGAATGAGGTGAGTGCGAGGCTTATCAAGGATTACATGCACAAAGTGGAGTCAGAGATTTCCAACATTTGCAGCGACATTATGATAATACTAGATGAGCATCTTATCCCATCCACTAATGTTGTGGAGTCGTCTGTGTTCTACTATAAGATGAAAGGAGATTATCATCGTTATTTAGCGGAGTTCAGAGCTGGTGATGAGAAGAAAGATGCAGCAGATCAGGCACTCAAAGCATATCAGGTCACCCTTCTTGACTCTACAGTACTCAGTGAAGGATGGTTTTGCTTAATGGTAACCCGTACAATGTTGCCGCATAAGCATCTTTTTAGTGAGCATCTTCATGCTGTATATTTAGTAGGATCTGTTTATCAACAATCTGATGAAATTTATTTTGCTTTCGGTCTTGCAAGGCGAGCTTTTGATGATGCTTGTGCAGAGCTGGATGACCATGATGAGGAATTGTACAAGGATAGTAGAATGATTTTGCAGCTATTGAGAGAGAACTGTGATTTGTGGAACTCTGATTTGCAAGGAGGTGGTGTTGAAGAGCTTTTCAAATTTCAAGGCAAGCCAAAAAGTAAAAACTTCGAGATAATGAAGATTTCTCAGTCCAATGATCTTTACCAAAACCAAAGCCAAGTTCCATTACCAACTTGA 1890 0.4042 MHRVGFRQDDCSFVCAIIASSNLSCPSNGKQIHALSIKSDIPSNRISVNNALVAMYSKCGILQDARRLFDRMLEHNVVTLNSMIAGYSQHSVEVESLHLFELMLQKNIASTSITFISILSACAHTGKVEEGKKYCNMMKEKFGIESEAEHFSCMIDLLGRARKLSEAERIMETMPFSPGSVEWGALLCACRKQMGEAASIKRLMRDVKKKPGCSWIELDKRVHKIKGSGYVSEVRWALVKDEENGVEEKERRLMHHSEKLAVAFGLIATREGTPILVVKNLRICGDCHNAIKFISAVTHREITVRDAYRIQVDAVICCLSCQNGRCIPILTANPMETGVKNPMTSEKVQQIDLGKLVCAEMVDIMKKLAKQDVELTVEERNLFSVGYKNVVGARRTSWRILSSIVPNEESKGNEVSARLIKDYMHKVESEISNICSDIMIILDEHLIPSTNVVESSVFYYKMKGDYHRYLAEFRAGDEKKDAADQALKAYQVTLLDSTVLSEGWFCLMVTRTMLPHKHLFSEHLHAVYLVGSVYQQSDEIYFAFGLARRAFDDACAELDDHDEELYKDSRMILQLLRENCDLWNSDLQGGGVEELFKFQGKPKSKNFEIMKISQSNDLYQNQSQVPLPT 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0712 629 Gene3D - 345 595 IPR036815 -
Lele31g0712 629 SUPERFAMILY 14-3-3 protein 362 593 IPR036815 -
Lele31g0712 629 Gene3D Tetratricopeptide repeat domain 45 296 IPR011990 GO:0005515
Lele31g0712 629 Coils Coil 239 259 - -
Lele31g0712 629 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 45 79 IPR002885 -
Lele31g0712 629 TIGRFAM PPR: pentatricopeptide repeat domain 113 144 IPR002885 -
Lele31g0712 629 PRINTS 14-3-3 protein zeta signature 374 403 IPR000308 -
Lele31g0712 629 PRINTS 14-3-3 protein zeta signature 454 476 IPR000308 -
Lele31g0712 629 PRINTS 14-3-3 protein zeta signature 423 447 IPR000308 -
Lele31g0712 629 SMART 1433_4 347 597 IPR023410 -
Lele31g0712 629 Pfam DYW family of nucleic acid deaminases 229 311 IPR032867 GO:0008270
Lele31g0712 629 Pfam 14-3-3 protein 359 492 IPR023410 -
Lele31g0712 629 Pfam 14-3-3 protein 534 584 IPR023410 -
Lele31g0712 629 FunFam pentatricopeptide repeat-containing protein At2g33680 49 199 - -
Lele31g0712 629 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1 192 - -
Lele31g0712 629 Pfam PPR repeat 113 141 IPR002885 -
Lele31g0712 629 Pfam PPR repeat 78 108 IPR002885 -
Lele31g0712 629 Pfam PPR repeat 150 174 IPR002885 -
Lele31g0712 629 Pfam PPR repeat 50 77 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0712 Lele-ChrLele31 14940872 14944538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0712 343 591 14-3-3 family AT1G34760 51.765 6.21e-74 236