Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0699 ATGGCAGGTGTTGGTCCTCTTACACAGGATTGGGAGCCCGTGGTGATCCGGAAGAAGGCACCAACAGCGGCGGCGAAGAAAGATGAGAAAGCTGTTAACGCCGCTCGTCGCTCCGGCGCCGATATTGATACCGTAAAAAAATTTAATGCTGCGACAAATAAAGCGGCCTCCAGCAGCACTTCTTTAAACACAAAGAAGCTTGATGAAGAAACTGAGAATCTTCATCATGAACGGGTACCAACTGAATTAAAGAAAGCCATCCAGCAGGCTAGGATGGAGAAAAAGCTTACCCAGTCTCAATTAGCTCAGATGATAAATGAGAAGCCTCAAATTATTCAGGAGTATGAATCAGGTAAAGCTATTCCAAATCAACAGATATTAGGTAAACTGGAGAGAGCTCTTGGTGCTAAACTGCGTGGAAAGAAATGA 429 0.4476 MAGVGPLTQDWEPVVIRKKAPTAAAKKDEKAVNAARRSGADIDTVKKFNAATNKAASSSTSLNTKKLDEETENLHHERVPTELKKAIQQARMEKKLTQSQLAQMINEKPQIIQEYESGKAIPNQQILGKLERALGAKLRGKK 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0699 142 FunFam Multiprotein bridging factor 1 71 142 - -
Lele31g0699 142 Gene3D - 71 142 IPR010982 GO:0003677
Lele31g0699 142 SMART mbf_short4 86 141 IPR001387 -
Lele31g0699 142 CDD HTH_XRE 85 135 IPR001387 -
Lele31g0699 142 SUPERFAMILY lambda repressor-like DNA-binding domains 81 138 IPR010982 GO:0003677
Lele31g0699 142 MobiDBLite consensus disorder prediction 65 81 - -
Lele31g0699 142 PANTHER ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 3 142 - -
Lele31g0699 142 MobiDBLite consensus disorder prediction 52 81 - -
Lele31g0699 142 Coils Coil 87 107 - -
Lele31g0699 142 Pfam Multiprotein bridging factor 1 9 79 IPR013729 -
Lele31g0699 142 ProSiteProfiles Cro/C1-type HTH domain profile. 87 141 IPR001387 -
Lele31g0699 142 Pfam Helix-turn-helix 87 137 IPR001387 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0699 Lele-ChrLele31 14835510 14838506 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MBF1 Lele31g0699 MBF1 3.8e-25 No_clan