Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0691 ATGGGAGGTGGATTTAGGGCGCTTCATCTGGTTAAACCGTTTCTGTCATTTGTGCCTGAAGTTGAGAGTCCCTACAAGAAAATCTCATTTAGGGAGAAGATGATATACACAGTGATATATCTCTCCATCTTCCTGGTTTGCAGTCAGCTACCTCTCTATGGAATACACTCAACTACTGGTTCAGATCCCTTATACTGGATGCGAGCCATTACTGCTTCGTCTCGAGGAACGGTTATGGAGCTCGGCATCGGTCCCATTGTAACTTCTGGTATGATAACGCAACTCTTGGTAGGTTCAAAGATCATCGAGGTGAACAATAATGTTCGTGAGGATCGTAATCTCTTGAGTGGAGCACAGAAGTTGCTTGGAATCTTGATTGCAGTTGGACAGGCAACTACCTATGTTTCTTCAGGGATGTATGGTAGTGTGAACCAACTTGGGGTAGGAAATGCTATTCTGATCGTTACTCAGCTTTGCTTGGCTAGCATCATTGTCATGTGTTTCGATGAGCTTCTTCAAAGAGGATATGGCCTTGGCTCTGGAATTTCACTCTTAATTGCTACTAATTTTTGTCCTACCACCATTAACAATGGACGAGGGGTTGAATTCGAGGGAGCTTTCATTGCTTTAGTTCATTTGTTGCTTACTCGAACCGACAAGGTCCGGGCTCTTCGCGAGGCGTTTTACCGACAAAATCTACCGAATGTCACAAATCTGCTTTCCACAGTGTTGATTTTCTTGATTGTGATATACTTCCAAGGTTTCCGTGTGGTTTTGCCAATAAGATCAAAGAATTCTCGTGGCTACAAAGGTTCATATCCAATCAAATTGTTCTATACCTCTAAAATGCCCATCATTCTTGTATCTTCCCTCGTTTTCAACTCCTACATGATCTCCCAGGTATTATATCGATTGTTTAAAGGAAACTTCATTGTAAATTTGATTGGAAGATGGAAAGAAACTGAATATGGTGGTAGTCACTCTATTCCTGTTGGGGGCCTTATATACTACATCACTGCCCCATCCAGCTTGGTTGATATTGCCGTGGATCCTATCCGTGCAATGTTTTATGTTGTGTTTATGTTGTCAGCGTGTGCCATATTCTCCAAATTATGGATCATAGTCTCTGGATCTTCTGCTAGAGATGTTGCCAAGCAACTTAAGGAGCAACAAATGGTGATGCCTGGGCATCGTGAGTCAAACTTAGAGAAGGAGTTGAATCGATATATCCCTGCCGCGGCGGCCTTTGGCGGCGTGTGCATCGGAGCTTTGACGGTGTTGGCAGATTTAATGGGAGCGATTGGGTCAGGGACTGGTATATTACTTGCAGTGACCACAATCTATCAATATTACGAGACATTTGAGAAGGAGAGAGCAACTCAACTTGGATTCTTTGGTTTTTAA 1404 0.4302 MGGGFRALHLVKPFLSFVPEVESPYKKISFREKMIYTVIYLSIFLVCSQLPLYGIHSTTGSDPLYWMRAITASSRGTVMELGIGPIVTSGMITQLLVGSKIIEVNNNVREDRNLLSGAQKLLGILIAVGQATTYVSSGMYGSVNQLGVGNAILIVTQLCLASIIVMCFDELLQRGYGLGSGISLLIATNFCPTTINNGRGVEFEGAFIALVHLLLTRTDKVRALREAFYRQNLPNVTNLLSTVLIFLIVIYFQGFRVVLPIRSKNSRGYKGSYPIKLFYTSKMPIILVSSLVFNSYMISQVLYRLFKGNFIVNLIGRWKETEYGGSHSIPVGGLIYYITAPSSLVDIAVDPIRAMFYVVFMLSACAIFSKLWIIVSGSSARDVAKQLKEQQMVMPGHRESNLEKELNRYIPAAAAFGGVCIGALTVLADLMGAIGSGTGILLAVTTIYQYYETFEKERATQLGFFGF 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0691 467 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 18 461 IPR002208 GO:0015031|GO:0016020
Lele31g0691 467 SUPERFAMILY Preprotein translocase SecY subunit 10 457 IPR023201 -
Lele31g0691 467 Gene3D SecY subunit domain 9 465 IPR023201 -
Lele31g0691 467 ProSitePatterns Protein secY signature 1. 77 96 IPR030659 -
Lele31g0691 467 FunFam Transport Sec61 subunit alpha isoform 2 9 464 - -
Lele31g0691 467 Pfam SecY 77 451 IPR002208 GO:0015031|GO:0016020
Lele31g0691 467 Pfam Plug domain of Sec61p 43 76 IPR019561 -
Lele31g0691 467 PIRSF SecY_Sec61alpha 8 462 IPR002208 GO:0015031|GO:0016020
Lele31g0691 467 TIGRFAM 3a0501s007: preprotein translocase, SecY subunit 31 458 IPR002208 GO:0015031|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0691 Lele-ChrLele31 14785377 14788035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0691 1 466 Miscellaneous Gene Families AT1G78720 77.895 0.0 756
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0839 29 5617267 5620001 Lele31g0691 31 14785377 14788035 hybridization