Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0685 ATGAACAGAAGCATGAAGATAACTTTCCCTCATCCTCATCTCTTCCTCTTTCTCATGATCTCTCTTTTGTGGTGGGCTTCGTCTGCATTCGGAGCCACCAACATACATCCATCCGAAAAGGAAGCTCTGAGAGACATAGCTAAGACGCTGGGAAAGGAAGATTGGAACTTCAACGTAGATCCATGCGATCCTTCTAATCCTGCCTTTGCACAGAGCAACTGGTTGACGCCAGCCCCAGTGGACAAAGAAAGTCAAAACGCCGTCGGATGCGATTGCGCCGTTGCCGATGACGGCTTCTGTCACATTCTCAACATAACTCTGAAGCAACAAAGTCTCCCGGGCAAGCTCCCGCCAGAACTCGTCAGATTACCTTACCTTTCCGTAATCGACCTGAGCCGCAACTACCTTAGCGGTCCAATCCCTTCAACTTGGGCCTCCCTTACACTTACGCACATTTCTCTTCTTGGTAACCGAATAACGGGTAAAATCCCAGTAGAGCTAACGAAGATCACTACTCTGCAACGTCTGGTCCTCGAGTTCAATCAATTTTCTGGAAATCTTCCTCCTGAGCTTGGCAATCTTCTCCATATTGAAGGACTGCTTCTTACTTCCAACAACTTCACTGGAGAAATACCTCCAACTTTCGCAAAGCTTACTAAATTGAAGGATATTCGACTAGGTGACAATCAATTCTCTGGAAAGCTACCTAACTTTATTCAGAACTGGAAAAGTCTTGACAAAATAATGGTTCAAGGGAGTGGTTTGAGTGGACCGATTTCTGGAATTTCATTTCCTGAACACTTAACGGACTTGAGGATAAGTGACTTAAATGGACCTGATTCAACTTTTCCTGCGCTCAATAACTTGGCAAAATTGAAAACATTGATATTGAGGAGATGCAATATCAATGGAGCAATACCTCCCTATCTTTGGAGAATGAGCAATTTAACAACCTTGGACCTGAGCTTTAACAAATTGCAAGGAAAAATTCCAGATGACTTTAATCGCCTACTACGATTGGATTACATGTACTTAACTGGAAACCTTCTTCATGGACCTGTGCCTAGGTTGAAAGTTGAATCCATAGATCTTTCGTACAACAACTTTAGCAGCAGAAACGCTGGGGAGGAGAAGTGTGATCAGCCAAAAGTGAACCTGTTTGGAGACCCTTTGATGGCCAATGACTCCTTTCCACTTTCTTTCAGAGGATCTGTTACTTGTATGAGAAGCCATTGTTCTAAAACCTGGTACTCTGTGAATATAAATTGTGGTGGAGATCAGGAAGCCATTGGAGATACAGTGTATGAAGGTGATTTAGATCTATATAGACAAGGATTTGCAAAGAGCGGAACTAACTGGGCAATTAGCAATACTGGCCACTTTTTAGATGCAAGACAAAAGGATTTCTATGTTGCACAAAACACTAGTCTCCCTGTGCCCAGTGTTAAACTGTACGGGAATGCACGTATTTCCCCTATTTCTCTGACCTATTATGCATTTTGCCTGGGAAATGGACCCTACACTGTGAGTCTCCATTTTGTGGAGATAATGTTCACTGATGATCAAACATATAGAAGCCTTGGAAGGCGTGTCTTTGATGTCTACATTCAGGAACAGCGAATGCTGAAGGATTTCAATATTGTGAATGAAGCAGGGGGAGTTTTTAAGCCAATCATAAAAAAATTTACTATAAACGTGACTAATGGCACCTTAAAGATTCGCTTCTATTGGGCTGGGAAAGGGACAACTGCTATACCAGAAAAGTCAGTTTATGGTCCTCTAATTTCAGCTATATCTGTAACTTCTGACTTTAAACCCCCAAGAAGCCTCCCTGGAGCGGTTGTGGCTACAATTGTGGCTGCAGGAGTGAGTATTGTCATCCTGATATTGGGCATACTCTTTTGGAGAGGTGCCCTAGGAAAAAGAAGTTCATCATTAGCAATGGAGCTAAAGAGCTTAGATCTGCAAACCGGTTTATTTTCCTTGCGCCAAATCAAAGCAGCAACAAATAACTTTGATGCATCTAATAAGATTGGAGAAGGAGGATTTGGTCCTGTTTACAAGGGATTTCTATCAGATGGCACAATGATAGCAGTGAAGCAGCTTTCTTCTAAATCAAACCAAGGAAACCGTGAGTTCATCAATGAGATAGGCATGATCTCTGCTTTGCAACACCCTTGTCTTGTTAAGCTCTATGGTTGTTGTGTTGAGGGGGATCAGTTGTTGTTGGTATATGAATACATGGAAAACAATAGCCTTGCTCGTGCCTTGTTTGGACCAGAGGAATTCCGTTTAAAATTGGATTGGCCAATGAGACTGAAGATTTGTGTCGATATTGCCCGAGGCTTAATTTTCCTCCACGAAGAATCAAGACTAAAGATTGTTCACCGGGACATCAAGGCCACTAATGTGCTACTTGACAAAGACCTAAAAGCAAAAATATCAGATTTTGGACTGGCAAAGCTTTATGAAGAGGACAATACCCACATAAGCACTCGAATTGCTGGGACCTATGGATATATGGCACCTGAATATGCAATGCACGGTTATTTGACCAACAAAGTAGATGTCTATAGTTTCGGAATTGTTGCTCTGGAAATTGTAAGTGGAAGGAGCAACACTTTTCGCCGACAAAAGGAAGACTGTTTCAATCTTCTTAATTGGGCACATGTTTTGAAAGAGAATGGCTATTTAATGGAACTAGTTGATTCAAGGTTGGGTTCAGATTTTGATAGAGAGGAGGTAATGGTGATGATCAATGTGGCTCTGCTATGCACTAATCCATCTTCATCACTGAGGCCCACCATGTCTTCAGTGCTAAGCATGCTTGAAGGAAGAACTGTAGTTCCAGAGTTCGTTTCTGATCAAAGTGAGGAAGCAAGTAAGATGAAGTTGGAGGCAATGAGACAATATTACAAAGTGGTAGACGAAGAAAATCAGACGAATGTTGAGACTGAAACTCATTCCAAGAGTCTCTTGGGGATGTCCACTTCTTCATCTACATCAGCTAGAGATCTCTATCCTGTTCGCCTTGATTCTTCCTACTTTGAGAAAAGAAAGTCTGAGACAGGATAG 3075 0.4215 MNRSMKITFPHPHLFLFLMISLLWWASSAFGATNIHPSEKEALRDIAKTLGKEDWNFNVDPCDPSNPAFAQSNWLTPAPVDKESQNAVGCDCAVADDGFCHILNITLKQQSLPGKLPPELVRLPYLSVIDLSRNYLSGPIPSTWASLTLTHISLLGNRITGKIPVELTKITTLQRLVLEFNQFSGNLPPELGNLLHIEGLLLTSNNFTGEIPPTFAKLTKLKDIRLGDNQFSGKLPNFIQNWKSLDKIMVQGSGLSGPISGISFPEHLTDLRISDLNGPDSTFPALNNLAKLKTLILRRCNINGAIPPYLWRMSNLTTLDLSFNKLQGKIPDDFNRLLRLDYMYLTGNLLHGPVPRLKVESIDLSYNNFSSRNAGEEKCDQPKVNLFGDPLMANDSFPLSFRGSVTCMRSHCSKTWYSVNINCGGDQEAIGDTVYEGDLDLYRQGFAKSGTNWAISNTGHFLDARQKDFYVAQNTSLPVPSVKLYGNARISPISLTYYAFCLGNGPYTVSLHFVEIMFTDDQTYRSLGRRVFDVYIQEQRMLKDFNIVNEAGGVFKPIIKKFTINVTNGTLKIRFYWAGKGTTAIPEKSVYGPLISAISVTSDFKPPRSLPGAVVATIVAAGVSIVILILGILFWRGALGKRSSSLAMELKSLDLQTGLFSLRQIKAATNNFDASNKIGEGGFGPVYKGFLSDGTMIAVKQLSSKSNQGNREFINEIGMISALQHPCLVKLYGCCVEGDQLLLVYEYMENNSLARALFGPEEFRLKLDWPMRLKICVDIARGLIFLHEESRLKIVHRDIKATNVLLDKDLKAKISDFGLAKLYEEDNTHISTRIAGTYGYMAPEYAMHGYLTNKVDVYSFGIVALEIVSGRSNTFRRQKEDCFNLLNWAHVLKENGYLMELVDSRLGSDFDREEVMVMINVALLCTNPSSSLRPTMSSVLSMLEGRTVVPEFVSDQSEEASKMKLEAMRQYYKVVDEENQTNVETETHSKSLLGMSTSSSTSARDLYPVRLDSSYFEKRKSETG 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0685 1024 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 41 211 - -
Lele31g0685 1024 Gene3D Ribonuclease Inhibitor 38 197 IPR032675 -
Lele31g0685 1024 SUPERFAMILY L domain-like 90 374 - -
Lele31g0685 1024 Pfam Malectin domain 418 598 IPR021720 -
Lele31g0685 1024 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 20 974 - -
Lele31g0685 1024 SMART serkin_6 672 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0685 1024 MobiDBLite consensus disorder prediction 982 1003 - -
Lele31g0685 1024 CDD STKc_IRAK 678 945 - -
Lele31g0685 1024 Pfam Leucine rich repeat 291 350 IPR001611 GO:0005515
Lele31g0685 1024 ProSiteProfiles Leucine-rich repeat profile. 315 337 IPR001611 GO:0005515
Lele31g0685 1024 SUPERFAMILY Protein kinase-like (PK-like) 655 952 IPR011009 -
Lele31g0685 1024 Gene3D Ribonuclease Inhibitor 264 385 IPR032675 -
Lele31g0685 1024 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 641 747 - -
Lele31g0685 1024 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 416 603 - -
Lele31g0685 1024 MobiDBLite consensus disorder prediction 985 1003 - -
Lele31g0685 1024 FunFam Putative LRR receptor-like serine/threonine-protein kinase 748 955 - -
Lele31g0685 1024 Pfam Protein tyrosine and serine/threonine kinase 675 892 IPR001245 GO:0004672|GO:0006468
Lele31g0685 1024 Gene3D Transferase(Phosphotransferase) domain 1 748 968 - -
Lele31g0685 1024 Gene3D Phosphorylase Kinase; domain 1 638 747 - -
Lele31g0685 1024 ProSiteProfiles Protein kinase domain profile. 672 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0685 1024 Gene3D - 416 604 - -
Lele31g0685 1024 ProSitePatterns Serine/Threonine protein kinases active-site signature. 794 806 IPR008271 GO:0004672|GO:0006468
Lele31g0685 1024 Gene3D Ribonuclease Inhibitor 198 263 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0685 Lele-ChrLele31 14722327 14732082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0685 22 983 Receptor kinase-like Gene Family AT1G53420 52.508 0.0 950
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele31g0685 PK_Tyr_Ser-Thr 3e-47 CL0016