Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0672 ATGATTCGAGATGCTCATGGTCGCAAGATGTCAAAGTCATTGGGAAATATTGTCGATCCCATTGAAGTGATCCATGGCATATCCTTGGTAGGTCTACATAAGAGGTTAGAAGAAGTGATCAATGGACGATATTTTCAAAGACGGGGACACAATAGGGACAATAAACTGATCTGCTGGTCTGCCCGCTCGCTAGGTTTTGCCGTTTGCTTGCTAAATCTTTTCGAACCCATGTTTTGGTGTCTCAGAAAAATCATCCCTTTTCGGAGGCATATCATTGACGCAATCTCTAATTCAACATCTCAACAATTTCATCGCGTTCAAAGCCAATGGCTACCTGCCACCGCCAGGTACTGTAATTCAACTGCATTCGATGGGCATTCTTTCACAGTCTCGTATCTCATTGACACATGTGGCTTCTCTCCCGAAGAAGCTGCTTCAGCTTCCAAGCATATCCGCTTGAAAACGCGAGAAAAACCGGATTTGGTTATCAATTTCTTGAAGAATCTCGGACTATCAAAATTCCAGATTCTTCGTTTCACAAGAGAAGTCCCCCAGTGTCTTCGATCTGACCCTGAGAAAACCTTACTCCCCAAGATCGAGTTTTTCATATCCAGAGGCGTTTCGAGCTCAGACATCCCTAAGCTCTTATGTAGTTGTCCTACCATTATGAAGAGAAGCTTAAATAAGCATATCATTCCTTCCTATGATTTCTTTCGAGATTTGTTTCAATCCGATGACAAGCTCATTAAAGCTCTTAAATATTGCTCGGGCATTCTTATTGATGTTAACACCCATGCCGTGCCTAATATGAATCTATTAAGAGAAGTCGGAGTTCCTGAATCAAATGTCATTAAATTGTTGCAACATCATCCTGGGACATTGACTTTTAGTACTGGTGGATTCAAGAGGATTGTGAAGGACATTCAGGAAATGGGGTTTGATCCTTTAAAGTATCACTTTGTTATGGCCGTTTATGCATTGTCATCACTAAGCAAATCTACATGGTCAAAAAAGGCCAACGTGTATAAGAAGTGGGGCTGGTCTGACAACGACATTATTGATGCTTTTAGAAGTTTTCCATTTTGTATGAAGGTATCTGAGAATAAAATTGATGCAACAATGGAGATTCTCGTTAGTAAATTGGGCTGTCCACCTTCCACTATTCCCAGATATGCGGTAGTTCTGGGACTAAGTGCAAATAAGCGAATTATTCCCCGGGCATCTGTCTTTCAAGTTTTGTTGTCAAAGGGTCTGGTGAAAAAGGAAAGCTTGCTCTCAATATTTATCTGCACTGAAAGGGAAATTTTAAGGAAGTATATCTTTTGCCATGAGCAGGAAGCTGGTGAATTATCGAAGTTGTATCAATCTAAATTGGATATTGCGAGGAAAGTGGAGACTGGATAG 1404 0.4088 MIRDAHGRKMSKSLGNIVDPIEVIHGISLVGLHKRLEEVINGRYFQRRGHNRDNKLICWSARSLGFAVCLLNLFEPMFWCLRKIIPFRRHIIDAISNSTSQQFHRVQSQWLPATARYCNSTAFDGHSFTVSYLIDTCGFSPEEAASASKHIRLKTREKPDLVINFLKNLGLSKFQILRFTREVPQCLRSDPEKTLLPKIEFFISRGVSSSDIPKLLCSCPTIMKRSLNKHIIPSYDFFRDLFQSDDKLIKALKYCSGILIDVNTHAVPNMNLLREVGVPESNVIKLLQHHPGTLTFSTGGFKRIVKDIQEMGFDPLKYHFVMAVYALSSLSKSTWSKKANVYKKWGWSDNDIIDAFRSFPFCMKVSENKIDATMEILVSKLGCPPSTIPRYAVVLGLSANKRIIPRASVFQVLLSKGLVKKESLLSIFICTEREILRKYIFCHEQEAGELSKLYQSKLDIARKVETG 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0672 467 Pfam tRNA synthetases class I (I, L, M and V) 1 25 IPR002300 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Lele31g0672 467 Gene3D HUPs 1 29 IPR014729 -
Lele31g0672 467 FunFam Mitochondrial transcription termination factor-like 227 447 - -
Lele31g0672 467 SMART mt_12 284 314 IPR003690 GO:0003690|GO:0006355
Lele31g0672 467 SMART mt_12 353 384 IPR003690 GO:0003690|GO:0006355
Lele31g0672 467 SMART mt_12 213 244 IPR003690 GO:0003690|GO:0006355
Lele31g0672 467 SMART mt_12 177 208 IPR003690 GO:0003690|GO:0006355
Lele31g0672 467 SMART mt_12 385 419 IPR003690 GO:0003690|GO:0006355
Lele31g0672 467 SUPERFAMILY Nucleotidylyl transferase 1 27 - -
Lele31g0672 467 Pfam mTERF 163 389 IPR003690 GO:0003690|GO:0006355
Lele31g0672 467 Pfam mTERF 329 433 IPR003690 GO:0003690|GO:0006355
Lele31g0672 467 PANTHER CGI-12 PROTEIN-RELATED 125 444 IPR003690 GO:0003690|GO:0006355
Lele31g0672 467 Gene3D Transcription termination factor 3, mitochondrial 127 259 IPR038538 -
Lele31g0672 467 Gene3D Transcription termination factor 3, mitochondrial 260 452 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0672 Lele-ChrLele31 14622066 14629686 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele31g0672 mTERF 1.5e-28 No_clan