Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0659 ATGGTTTGGCCTTTTGTGCTTTTTATTCTTTTTGGCCATACACTCCGTTTTCACACGTTCATGTACAGACCAAGTTTTTCATGCGACAAAATGAACAACTTTACGCTTTTCAACGCGTCAAAGTCTGCCTTCAGGTTCTTCAAAATGATGAGCAAGTATTTGCTTTTAGGCTTTTACATCACAGTATCCTGCATCGCTTTTGTTATATCCAAGATCATTATCTCAGTCCTCCTCTACAAAAGATGGAAAAGAAAGCACATGATTCACGAAGAAGGCTGTGCAGGTGGGAAGATGGTGATATTCAGGTCTTCGGTTCTGCAAACCCTCGAATTTGACACGATCTTGAAGAAGAAGACGATGATGAACCTGAATAATATGGAGGTAATTGGATGTGGTGGTTATGGGACGGTTTATAAACTGAAAATAGACGAGTCAAAAGCTTTTGCAGTGAAAAGACTGAACAGGGGAACTGCAGATAAAGGATTTGATAGAGAGCTGGAAGCAATGGCAGACATAAAACACCGCAATATTGTAACTCTTCATGGATATTATACGGCTCCACATTACAACCTCCTCATTTATGAGTTGATGCCTAATGGAAGTTTGGATAATTTCCTCTACAGAAGACCAGAGCAGAAGAAAACTTTAATTTGGTCATCAAGATACAGAATAGCTATAGGTGCGGCTAGAGGTATATCTTATCTTCACCATGATTGTATCCCTCACATAATCCACAGAGATATCAAGTCAAGCAACATATTACTCGACGAAAACATGGAGGCTCGAGTTTCTGATTTCGGATTAGCCACGTTGATGGAACCTGACAGAACCCATGTTTCCACAATTGTGGCTGGAACTTTTGGATACTTAGCTCCTGAATATTTCGATACGGGAAGAGCAACATTCAAGGGGGATGTTTACAGTTATGGAGTTGTACTACTGGAGCTTTTAACTGGGAGAAAACCCAGTGATGAAACATTTATGGAAGAAGGAACGAAGCTGGTCACATGGGTGAAGGCTATTGTTCAAGAAAAGAAGGAGGAACTAGTTCTCGATGATAGGCTAGGGACCTGTCCAATGCAAGAAGTTAACAATGTGTTCAATATCGCCATGATGTGTCTTGAATCTGATCCCTTGAAGAGACCGACAATGGAAGAAGTTGTCAGTTTGCTTGAGCAAACGAAGCCGGACAAACTCGGTACAGCTTCCTGA 1212 0.4109 MVWPFVLFILFGHTLRFHTFMYRPSFSCDKMNNFTLFNASKSAFRFFKMMSKYLLLGFYITVSCIAFVISKIIISVLLYKRWKRKHMIHEEGCAGGKMVIFRSSVLQTLEFDTILKKKTMMNLNNMEVIGCGGYGTVYKLKIDESKAFAVKRLNRGTADKGFDRELEAMADIKHRNIVTLHGYYTAPHYNLLIYELMPNGSLDNFLYRRPEQKKTLIWSSRYRIAIGAARGISYLHHDCIPHIIHRDIKSSNILLDENMEARVSDFGLATLMEPDRTHVSTIVAGTFGYLAPEYFDTGRATFKGDVYSYGVVLLELLTGRKPSDETFMEEGTKLVTWVKAIVQEKKEELVLDDRLGTCPMQEVNNVFNIAMMCLESDPLKRPTMEEVVSLLEQTKPDKLGTAS 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0659 403 SUPERFAMILY Protein kinase-like (PK-like) 112 393 IPR011009 -
Lele31g0659 403 Pfam Protein kinase domain 125 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0659 403 SMART serkin_6 123 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0659 403 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 197 401 - -
Lele31g0659 403 PIRSF TyrPK_CSF1-R 222 402 - -
Lele31g0659 403 PIRSF TyrPK_CSF1-R 128 225 - -
Lele31g0659 403 PIRSF TyrPK_CSF1-R 13 88 - -
Lele31g0659 403 ProSiteProfiles Protein kinase domain profile. 123 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0659 403 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 56 395 - -
Lele31g0659 403 Gene3D Transferase(Phosphotransferase) domain 1 197 399 - -
Lele31g0659 403 Gene3D Phosphorylase Kinase; domain 1 99 196 - -
Lele31g0659 403 ProSitePatterns Serine/Threonine protein kinases active-site signature. 243 255 IPR008271 GO:0004672|GO:0006468
Lele31g0659 403 FunFam Receptor-like serine/threonine-protein kinase 92 196 - -
Lele31g0659 403 ProSitePatterns Protein kinases ATP-binding region signature. 129 151 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0659 Lele-ChrLele31 14548042 14552348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0659 28 393 Receptor kinase-like Gene Family AT2G35620 45.430 4.29e-99 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Lele31g0659 Pkinase 1.5e-48 CL0016