Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0627 ATGTTGAATAATATAATGTCAAGCAGCTCACAAGTTATAACTTGCAAAGGAGCAATATGTTGGGGAATAGGAGAGGGAGTGAAAGTGGAAGAGATACAAGTAGATCCTCCTAAAGCTTCTGAAGTCCGAGTTAAAATGCTTTGTGCCAGTTTATGCCACACAGACATCTTGAGAACTCAAGGATGGCCATATCCCGGTTTTCCTTTAGCACTAGGGCATGAAGGTGTAGGGGTTGTGGAGAGCGTAGGGGAGAAAGTGACAAATTTCAAGGAAGGAGATGTAGTGATTCCAGTGTACATAGGAGAGTGTGGAGAATGTGAGAATTGTGTTTCAGAGGAATCAAACTTATGCATGAGATATCCTGTGAGGGTGAGTGGACTAATGCCTGATGACACATCAAGGATTTCAGTAAGAGGGCAAAAGGCATACCATGTGTTTAGCTGCTCAACATGGTGTGAGTATATGGTTAGTGATGAAAACTACCTTATGAAAGTTGATCCAAATATTAATTTGGCTTATGCTAGCTTCATCTCTTGTGGATTCTCTACTGGTTTTGGAGCTTCTTGGAAGACTGCCCAAGTTCAAAGTGGAACATCTGTGGCTGTTTTTGGCCTTGGAGCTGTTGGATTAGGGGCTATAAGTGGAGCCAAGATGATGGGAGCAACAAAGATAATAGGGATTGACAAAAATGAGAAGAAGAGAGAAAAAGGAGAAGCTTTTGGAATGACAGACTTCATAAATCCAAATGATCATTCTAATAAGACTTGTTCTGAATTGGTGAAGGAACTCACTAATGGATTGGGTGTGGATTATTCCTTTGAGTGCACTGGTGTTGCCCCTTTACTTGCCCAAGCCCTAGAATCCACAAAATTGGGGAGAGGAAAGGCAATAGCAATCGGTTCAGGGAAAGAGGAATTTGTGCAGGTGAACTGGTTAGGTCTTCTTCTTGGAAGAACTTTAAAGGGTTCAGCTTTTGGTGGCTTAAAACCCAAATCTGATCTCCCATTTATAGCTACCAAATGTCAAAACAAGGATTTCCCTCTTGATGAACTTCAGACCCATGAAATCCCTTTGACAGAGATAAGCAAAGCATTTGAGCTATCAAAACAGCCAGAATGTGTCAAAGTTATCATCAAGATGTGA 1143 0.4138 MLNNIMSSSSQVITCKGAICWGIGEGVKVEEIQVDPPKASEVRVKMLCASLCHTDILRTQGWPYPGFPLALGHEGVGVVESVGEKVTNFKEGDVVIPVYIGECGECENCVSEESNLCMRYPVRVSGLMPDDTSRISVRGQKAYHVFSCSTWCEYMVSDENYLMKVDPNINLAYASFISCGFSTGFGASWKTAQVQSGTSVAVFGLGAVGLGAISGAKMMGATKIIGIDKNEKKREKGEAFGMTDFINPNDHSNKTCSELVKELTNGLGVDYSFECTGVAPLLAQALESTKLGRGKAIAIGSGKEEFVQVNWLGLLLGRTLKGSAFGGLKPKSDLPFIATKCQNKDFPLDELQTHEIPLTEISKAFELSKQPECVKVIIKM 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0627 380 FunFam alcohol dehydrogenase 1-like isoform X1 23 183 - -
Lele31g0627 380 CDD liver_alcohol_DH_like 13 379 - -
Lele31g0627 380 FunFam S-(hydroxymethyl)glutathione dehydrogenase 184 323 - -
Lele31g0627 380 Gene3D - 184 323 - -
Lele31g0627 380 SUPERFAMILY GroES-like 9 193 IPR011032 -
Lele31g0627 380 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 72 86 IPR002328 GO:0008270|GO:0016491
Lele31g0627 380 Gene3D - 19 375 - -
Lele31g0627 380 SMART PKS_ER_names_mod 22 378 IPR020843 GO:0016491
Lele31g0627 380 PANTHER ALCOHOL DEHYDROGENASE 11 372 - -
Lele31g0627 380 SUPERFAMILY GroES-like 331 378 IPR011032 -
Lele31g0627 380 Pfam Zinc-binding dehydrogenase 207 327 IPR013149 -
Lele31g0627 380 Pfam Alcohol dehydrogenase GroES-like domain 40 165 IPR013154 -
Lele31g0627 380 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 170 341 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0627 Lele-ChrLele31 14314465 14316566 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0627 41 340 Monolignol Biosynthesis Gene Families AT4G37990 26.557 3.28e-16 77.4