Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0616 ATGATTGATCAGCTACATCCCACCATCCCAGAAATCAATCCCACAAACCCCACCTCGCCAATCATGGGAGGTACTGCAGCAGCTGGAGGGGTCAACGAGGAAGATGATGATGGGTTCGATAATAATGGGGTGGAAGAGAACAAGTGGCCGCCATGGCTGAAGCCGCTTCTGCTAACAAGCTTCTTCGTTCAATGCAAAGTCCACGCCGATTCGCATAAGAGTGAATGCAATATGTATTGCTTGGACTGTATGAATGGAGCCCTCTGCTCTGCTTGCTTGGCTTCTCACAGAGACCACAGAGCTATTCAGATAAGGAGGTCTTCATACCATGATGTGATTAGAGTGTCTGAGATTCAGAAATTTCTGGACATAACAGGGGTCCAGACTTACATTATAAACAGTGCCAAGATTGTGTTCTTGAATGAAAGGCCTCAGCCTAGGCCTGGCAAGGGAGTTACAAATACCTGTCAGGTCTGTGAACGCAGCCTCCTTGATTCCTTCAACTTCTGCTCTCTTGGATGCAAGGTTGTTGGAACATCCAATAAGTTCCGGAAGAAGAGAATGTTAAGAGAGCAAGAGGGTTCTGATGGTGAAGAATCAATGAATGGGCATAGCAATGGAAGCGGCAGGAGCAGAATCCAGAGCTTCACGCCGTCAACTCCACCAGCGACGGGGATGAACTACCAAACTGCCAAGAGAAGGAAGGGAATTCCTCACAGGGCTCCATTTGGCGCAGGACTCATCATACAATACTGA 756 0.4802 MIDQLHPTIPEINPTNPTSPIMGGTAAAGGVNEEDDDGFDNNGVEENKWPPWLKPLLLTSFFVQCKVHADSHKSECNMYCLDCMNGALCSACLASHRDHRAIQIRRSSYHDVIRVSEIQKFLDITGVQTYIINSAKIVFLNERPQPRPGKGVTNTCQVCERSLLDSFNFCSLGCKVVGTSNKFRKKRMLREQEGSDGEESMNGHSNGSGRSRIQSFTPSTPPATGMNYQTAKRRKGIPHRAPFGAGLIIQY 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0616 251 MobiDBLite consensus disorder prediction 199 227 - -
Lele31g0616 251 Pfam PLATZ transcription factor 105 176 IPR006734 -
Lele31g0616 251 CDD Bbox2 65 104 - -
Lele31g0616 251 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 44 243 - -
Lele31g0616 251 MobiDBLite consensus disorder prediction 1 34 - -
Lele31g0616 251 MobiDBLite consensus disorder prediction 190 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0616 Lele-ChrLele31 14206549 14208352 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lele31g0616 PLATZ 2.8e-29 No_clan