Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0569 ATGATGGACGGAGTTCATGGCGGTGCTGCGGCAAATGTGAATTCTCCGCCGCCATTCCTCAGCAAGACCTATGACATGGTGGACGACCCTTCTACAAACTCGGTGGTCTCATGGAGTGATAATAACAACAGTTTTGTTGTTTGGGATGTGCCCGAATTTGCTAGGGACATCTTGCCCAAGTATTTTAAGCACAACAATTTCTCCAGCTTCGTCAGGCAATTGAATACTTACGGTTTTCGAAAGGTTGACCCAGACCGCTGGGAATTTGCAAATGAAGGATTTTTAAAGGGTCAGAAACAACTTTTGAAGAGTATCAGTAGGAGGAAATCTGCTCAAGTGAATGGTAATCAACAGCCATCTCCGGCACAGACTAAACCTGTTGCGGCATGTATTGAGGTTGGGAATTTTGGGCTTGAGGAAGAGGTTGAAAGATTGAAAAGGGATAAGAATGTTCTTATGCAAGAACTTGTAAGGTTGAGACAACAGCAACAAGCAACTGATAACCAACTGCAAAGTGTTGGGCAACGTGTGCAGGTTATGGAGCAGCGTCAACAACAAATGATGTCATTTCTGGCAAAGGCCATGCAAAGCCCAGGATTCTTGGCACAGTTTGTACAGCAGCAGAGTGACAGTAACAGACATATTACTGGAGGCAATAAAAAGAGGAGACTCCACAGGCAGGAAGAAGATACATTACCCTCTGATAATCTCTATAATGCTCTCGATGGACGTGTTATTAAATATCAACCTTCTATGAATGAGGCTGCAAAAGCATTATTGCGCCAGATATTGCAAATGAATGCTTCTTCAAGGAGGGAATCATCAATAAACAACCCTGATGCTTTTCTCATTAATGATGTTCCTTCTGCCATTCCGTTAGATAGTGGGAGTTCCTCTAATCGGGCTTCAGGAGTGACTCTCTCTGAGGTTCCACCTACTTCTGGCCAGTCTTATATGGCAGGCCAATCACAATTCCCTATTAATCGTGTTCCCACCAACATATCTGAGATGCAATCTTCAAGTGCTGTGTTTACTGACCCTGTTAAAGAAGCTGAATTTCCGGGATTAAATTTGCATAATTGCCCAGAGAATGTTTTGGGTATTGGTGAAGTCCAAGGTGTGGAGATAGAGAGCAGTTTAGTGAACCCTGAACTCACTTTTGCGGGGCCCAACACTGGGAATGCAGGGGACATAGACATGATGTCAGCAGTTTTGGATGGGACACAGTCTGTAGAACTAGAAGCTGATGCCTTTTCACCTGATCCGGATGGAATTTCTAAGCTCCCAAGCATTAGTGATGTTTTCTGGGAACAGTTTCTCACAGCAAGTCCGCTTACAGGCGATACAGATGAAATTAGTTCTTCCTCTCTTGGAGATGGTTTGGCCAAGGAAGGGGAATCTCCATCTAGAAAGGAGAATGGACAGGAAAAGTTGGATAAGATAAAACATATGGATCATCTTACTCAACAGATGGAACTTCTTGCTTCCAACACTTCCTAA 1500 0.4373 MMDGVHGGAAANVNSPPPFLSKTYDMVDDPSTNSVVSWSDNNNSFVVWDVPEFARDILPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLKGQKQLLKSISRRKSAQVNGNQQPSPAQTKPVAACIEVGNFGLEEEVERLKRDKNVLMQELVRLRQQQQATDNQLQSVGQRVQVMEQRQQQMMSFLAKAMQSPGFLAQFVQQQSDSNRHITGGNKKRRLHRQEEDTLPSDNLYNALDGRVIKYQPSMNEAAKALLRQILQMNASSRRESSINNPDAFLINDVPSAIPLDSGSSSNRASGVTLSEVPPTSGQSYMAGQSQFPINRVPTNISEMQSSSAVFTDPVKEAEFPGLNLHNCPENVLGIGEVQGVEIESSLVNPELTFAGPNTGNAGDIDMMSAVLDGTQSVELEADAFSPDPDGISKLPSISDVFWEQFLTASPLTGDTDEISSSSLGDGLAKEGESPSRKENGQEKLDKIKHMDHLTQQMELLASNTS 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0569 499 Gene3D - 11 109 IPR036388 -
Lele31g0569 499 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 13 317 IPR027725 -
Lele31g0569 499 SUPERFAMILY "Winged helix" DNA-binding domain 14 108 IPR036390 -
Lele31g0569 499 MobiDBLite consensus disorder prediction 446 477 - -
Lele31g0569 499 SMART hsfneu3 15 108 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele31g0569 499 MobiDBLite consensus disorder prediction 295 318 - -
Lele31g0569 499 Pfam HSF-type DNA-binding 19 108 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele31g0569 499 PRINTS Heat shock factor (HSF) domain signature 57 69 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele31g0569 499 PRINTS Heat shock factor (HSF) domain signature 19 42 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele31g0569 499 PRINTS Heat shock factor (HSF) domain signature 70 82 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele31g0569 499 Coils Coil 135 162 - -
Lele31g0569 499 FunFam Heat shock transcription factor 1 12 109 - -
Lele31g0569 499 ProSitePatterns HSF-type DNA-binding domain signature. 58 82 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele31g0569 499 MobiDBLite consensus disorder prediction 212 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0569 Lele-ChrLele31 13639338 13644885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0569 13 496 HSF AT5G16820 54.747 4.35e-158 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lele31g0569 HSF_DNA-bind 4.6e-33 CL0123