Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0562 ATGAAACTCTCTTTCTCTGTGCAATCGAAATCCAACTCCAAAGCAAACCCCATCAGGCCCTCCAACAAATTCGACGCCGCCGATACCAAAGATGGAAACTCCAAGACCAAAGAGTATGTTACAGAGTTCGATGCATCGAAATCCCCTTCTGATCCTAACAAATCCACCATCGTTATCCCCCCTATTGAGAACGAGTGGAATTTAGGGAGGTCCCTCAAGAGAATGAAGAATCTAGACTTACCCATCACTGAATCTAATGGAACAGAGTTGGGATTTGAGCTGGATACGTCAACAGTTGTGGAACCCGGTTCGGACATGTCTTATGGTCTGAATCTTCGGCAGATAAAGAAGAACGATGGGGACGGGGAGAAACCTGCTGCTGTCAGTAGTGGTGGTGATGATAATAACGGAAGGTCGCGGCCCGTTTCTCTGGACTCTGTGGTGCTGCAGAAATTTAAGGATGATATGAAGAGGTTACCGGACGATAGAGGTTTTGAGGAGTTCCAAGATGTTGCTGTTGAGGGTTTTGGTGCAGCTTTGCTTGCTGGGTATGGATGGCGTGAAGGAATGGGCATTGGAAAGAATGCGAAGGAGGACGTGAAAGTTGTACAGTATGAGAAGAGGACTGCTAAAGAAGGGCTGGGTTTTGTCAGTGATCATGCTCGTAAGAGTTCAAAGGAGGAAGTGAAGATACCTAAGGAGTCTCGTGGAGGTAGTTCCTTCTTGGGGAAGTTTGTTAGAATAGTTGAAGGCAGAAATGCAGGTCTGAAAGGTAAAATTGTTCGAGAAGTTGAAGATAAATGGGTTATTTTAAAGCTTTCGGAGAGTGAAGAGGAAGTAAAAGTGGACCTTGGCGATTTTGTAGAATTGGGTTCTACTGAAGAAGAGAGGTTCTTGAAGAAATTGAAGGAGTTAAAGATTCAACATGCTGATAAAGATAGAGATTCAAGGAATAAACGTGGTAGAGATGAGGGAAGGAGAGGCCGCAATGAGGTTGTAGTTGATGTTAAAAGAGATAGTAGGAAGGAAGAGCAGGGGAAGAAACAAGTTTCATGGCTTACAAGTCATATTCGGGTCAGGGTTATTGGCAAAGATTTCAAAGGAGGGAGATTATATTTGAAGAAGGGGCAGGTATTGGACGTTGTTGGGCCTACTACTTGCGATATATCTATGGATGATAGCAAGGAGATCATCCAGGGGGTTTCCCAAGACCTTCTTGAGACTGCTATCCCTCGCCGAGGAGGGCGAGTTCTGGTATTATATGGTAAACATAAAGGTGTTTATGGGAGTCTAGTTGAGAGGGATTTGGACAAAGAAATGGCTGTTGTTAAAGATGCTGATACCCATGCACTGGTCAATGTGCGGCTTGAACAAATTGCAGAGTTTATAGGGGATCCAAGTATCTTGGGATACTGA 1416 0.4442 MKLSFSVQSKSNSKANPIRPSNKFDAADTKDGNSKTKEYVTEFDASKSPSDPNKSTIVIPPIENEWNLGRSLKRMKNLDLPITESNGTELGFELDTSTVVEPGSDMSYGLNLRQIKKNDGDGEKPAAVSSGGDDNNGRSRPVSLDSVVLQKFKDDMKRLPDDRGFEEFQDVAVEGFGAALLAGYGWREGMGIGKNAKEDVKVVQYEKRTAKEGLGFVSDHARKSSKEEVKIPKESRGGSSFLGKFVRIVEGRNAGLKGKIVREVEDKWVILKLSESEEEVKVDLGDFVELGSTEEERFLKKLKELKIQHADKDRDSRNKRGRDEGRRGRNEVVVDVKRDSRKEEQGKKQVSWLTSHIRVRVIGKDFKGGRLYLKKGQVLDVVGPTTCDISMDDSKEIIQGVSQDLLETAIPRRGGRVLVLYGKHKGVYGSLVERDLDKEMAVVKDADTHALVNVRLEQIAEFIGDPSILGY 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0562 471 MobiDBLite consensus disorder prediction 24 44 - -
Lele31g0562 471 ProSiteProfiles G-patch domain profile. 173 219 IPR000467 GO:0003676
Lele31g0562 471 MobiDBLite consensus disorder prediction 1 19 - -
Lele31g0562 471 Pfam G-patch domain 160 218 IPR026822 -
Lele31g0562 471 MobiDBLite consensus disorder prediction 310 330 - -
Lele31g0562 471 PANTHER G PATCH AND KOW-CONTAINING 1 467 IPR045166 GO:0000398
Lele31g0562 471 Gene3D - 356 410 - -
Lele31g0562 471 SMART G-patch_5 171 217 IPR000467 GO:0003676
Lele31g0562 471 MobiDBLite consensus disorder prediction 1 58 - -
Lele31g0562 471 MobiDBLite consensus disorder prediction 116 142 - -
Lele31g0562 471 SMART kow_9 410 437 IPR005824 -
Lele31g0562 471 SMART kow_9 239 266 IPR005824 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0562 Lele-ChrLele31 13585370 13586785 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0562 352 444 C2H2 Transcription Factor Family AT1G55460 34.409 5.44e-06 46.6