Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0551 ATGGGTCTGGTCATTATGTGTCTTTTATGGCAATTAACAAAGAAGGTGTTCCTTGGCACACTCCGAGAGGCTGAGGTTGAGAGGCTTAATGAGCAATCATGGAGGGAGGTTATGGAAATTCTCTTTGCCATCACCATTTTTAGGCAGGATTTCTCTGTTACATTCCTTGCTATGGTTACAGCACTGTTGTTGATCAAAGCTTTACATTGGTTGGCTCAGAAAAGAGTTGAATATATTGAGACGACTCCTACAGTGCCTTTGTTGTCTCACATTCGAATTGTGTCTTTCATGGGTTTCCTCCTCCTTCTGGATGGACTCTTTTTGTATAGTTCCTTGGACCATTTGATACAATCATGGCAGGCTTCAGTTTCCCTCTTTTTTGCTTTCGAGTACATGATACTGGCAACAACAACAGTGTCAATTTTTGTAAAATATCTTTTCTACGTTAGCGACATGCTTATGGAAGGACAATGGGAAAAGAAACCAGTCTTCACATTCTACTTGGATCTCATTAGGGATCTGCTTCACTTGTCGATGTATATGTGTTTCTTCCTTGTCATTTTCATAAATTATGGTGTGCCTTTGCACTTAATACGGGAGCTGTATGAGACATTTAGGAACTTCAAAGTTCGTGTTGCTGACTACATTCGTTATCGCAAGATAACTTCAAATATGAATGATCGGTTTCCAGATGCAACCCCTGAAGAACTTAATGCAAGCGATGCTACATGTATTATCTGTCGTGAAGAGATGACTACAGCCAAGAAACTTATATGCGGACATCTGTTTCATGTGCATTGCCTCCGATCATGGTTGGAGCGACAACATACTTGCCCTACCTGCAGAGCCTTGGTTGTACCACCTGAAAGTGGGGCAACTAATGCTGGAGGGCAGCATGGATCACAGTCAGATCGACAAGGAACAAGTACTGGAAGCTCACTTCAAGCTGAAGTTGGCAGTGGGGCGGCTACTGATAATTTAAGTCGTCATCAAGCTAGACTCCGAGCTGCAGCTGCTGCTGCTTCAATGTACGAGAAGTCTTACGTGTACCCATCTGCAACTTCTTCAGTATGCGCCCCTGGATACACTGTTTATCCTCCTGTTCAAAGACCCACTGCTGAATATAACGCTGAACTTAATGTAGAACATACTTCAAGTGAACAAACACGACGACGGTTTGTCATCCCTGGTGGACCAATGAATGTTTCTTTTCATTCGATGGGACTGTTTCCTTTTCCTCCTTCTCTAACACATGTAGCAAATGGGAATGGGAATTATGGAGAGGGATCTGGATCTGATCCAAATATGCCAAACTCTCTGCTCGAACTCGAAGCTCAAAGAATTCACCACCAGATTGAGATTCTGCAAAATCAGCTCCAAATTCTGCAGAAGGAAAGTGTTGAGGAAAATGCAAATGAGGGCAAGTCATCAACAAGTAGCAAAGACAAGCAGGTTGCTTCCTCTTCTTCATCGTAA 1476 0.4282 MGLVIMCLLWQLTKKVFLGTLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLAQKRVEYIETTPTVPLLSHIRIVSFMGFLLLLDGLFLYSSLDHLIQSWQASVSLFFAFEYMILATTTVSIFVKYLFYVSDMLMEGQWEKKPVFTFYLDLIRDLLHLSMYMCFFLVIFINYGVPLHLIRELYETFRNFKVRVADYIRYRKITSNMNDRFPDATPEELNASDATCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPESGATNAGGQHGSQSDRQGTSTGSSLQAEVGSGAATDNLSRHQARLRAAAAAASMYEKSYVYPSATSSVCAPGYTVYPPVQRPTAEYNAELNVEHTSSEQTRRRFVIPGGPMNVSFHSMGLFPFPPSLTHVANGNGNYGEGSGSDPNMPNSLLELEAQRIHHQIEILQNQLQILQKESVEENANEGKSSTSSKDKQVASSSSS 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0551 491 MobiDBLite consensus disorder prediction 292 327 - -
Lele31g0551 491 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 216 288 IPR013083 -
Lele31g0551 491 PANTHER RING ZINC FINGER PROTEIN 2 460 - -
Lele31g0551 491 FunFam ERAD-associated E3 ubiquitin-protein ligase HRD1A 216 291 - -
Lele31g0551 491 Pfam Ring finger domain 243 282 IPR001841 -
Lele31g0551 491 SUPERFAMILY RING/U-box 224 288 - -
Lele31g0551 491 SMART ring_2 244 281 IPR001841 -
Lele31g0551 491 Coils Coil 438 472 - -
Lele31g0551 491 MobiDBLite consensus disorder prediction 294 327 - -
Lele31g0551 491 MobiDBLite consensus disorder prediction 466 491 - -
Lele31g0551 491 CDD RING-H2_synoviolin 241 282 - -
Lele31g0551 491 ProSiteProfiles Zinc finger RING-type profile. 244 282 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0551 Lele-ChrLele31 13486182 13491785 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0551 1 482 C3H Transcription Factor Family AT3G16090 62.090 0.0 576