Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0538 ATGAGTTGCAGCTCCGGCGACAACAATGGAAGCAGCATCACAAACAGGGATAGCGCCGTCAAGTACAAGGGAGTCCGGCAAAGGAAATGGGGCAAGTGGGTATCGGAGATTCGAGTCCCGGGGTCACAAGAGCGGCTGTGGTTGGGCACATATTCGTCGCCGGAGGCAGCGGCAGTGGCTCACGACGTGGCTTTCTACTGCCTGAGGAGACCGGCGACATTGGAGAAGCTCAACCTCCCGGAGATGTTACCTTCTTGTTATGTCTCGCAGCAGCGAGAAATGTCTCCGAGGACGGTTCAGGCGGAGGCTTCAAATGCCGGCATGGCCGTTGATGCACAGAGGATTATTGAAGCAGAAGAGAAGAATGAGAAAACAGAGGAGCACAGAGAAAACAGAGACATGAATGATGATGGGTTTTGGTGGGACTGGAATGGTGACGATGGCAGCAGCAGCGGAGCTGGCGGGGGCCGTTTCTGGCAAGGAATCGCCGAAGGTTGTACACAAGGAGAAGAATCGAGCATCTCCATTGATGATTATTTTCAGGATCTTCAACATTGTTAG 561 0.533 MSCSSGDNNGSSITNRDSAVKYKGVRQRKWGKWVSEIRVPGSQERLWLGTYSSPEAAAVAHDVAFYCLRRPATLEKLNLPEMLPSCYVSQQREMSPRTVQAEASNAGMAVDAQRIIEAEEKNEKTEEHRENRDMNDDGFWWDWNGDDGSSSGAGGGRFWQGIAEGCTQGEESSISIDDYFQDLQHC 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0538 186 SMART rav1_2 21 86 IPR001471 GO:0003700|GO:0006355
Lele31g0538 186 CDD AP2 21 81 IPR001471 GO:0003700|GO:0006355
Lele31g0538 186 Gene3D AP2/ERF domain 20 81 IPR036955 GO:0003700|GO:0006355
Lele31g0538 186 PRINTS Ethylene responsive element binding protein signature 22 33 IPR001471 GO:0003700|GO:0006355
Lele31g0538 186 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
Lele31g0538 186 Pfam AP2 domain 21 70 IPR001471 GO:0003700|GO:0006355
Lele31g0538 186 ProSiteProfiles AP2/ERF domain profile. 21 80 IPR001471 GO:0003700|GO:0006355
Lele31g0538 186 SUPERFAMILY DNA-binding domain 21 74 IPR016177 GO:0003677
Lele31g0538 186 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 16 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0538 Lele-ChrLele31 13324034 13324594 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0538 17 112 AP2-EREBP Transcription Factor Family AT1G22810 62.500 3.33e-40 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele31g0538 AP2 1e-10 CL0081