Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0534 ATGGACGTGTCTTCTGATATCTCACATGGCGCTTCGTCTTCTCCATACAGAGGTGTTCGCAAGAGGAAATGGGGGAAATGGGTGTCTGAAATCAGAGAGCCCGGAACGAAGACGAGAATTTGGTTGGGCAGCTTCAAGACGCCAGAGATGGCCGCTGCAGCCTACGACGTCGCCGCATTGCACTTTCGGGGACGAGAAGCGAGGCTTAACTTCCCCGAGCTCGCCGGCAGCCTGCCTCGTCCGGCCAGTAATGACGCCGATGACATTCGCCTGGCGGCACACGAGGCCGCCTTGAGTCTGATAACGACCGAGTCCACCGCAGTTCTGGAGCAGTCGTCCTGCTCCGAGGAGGCGCCGGTGATGGTCCGACTTTCGCCGGTGCAGATTCAGGCGATCAATGAGATGCCGTTGGACTCGCCGAGGATGTGGATGCAAATGGCGGATTCAATGATGTTGGATGAAACGATGACGTTTGTGTATGAGTATGGCGAGGATATGCCAAGTGATTCTCTATGGGATCCATAG 525 0.5619 MDVSSDISHGASSSPYRGVRKRKWGKWVSEIREPGTKTRIWLGSFKTPEMAAAAYDVAALHFRGREARLNFPELAGSLPRPASNDADDIRLAAHEAALSLITTESTAVLEQSSCSEEAPVMVRLSPVQIQAINEMPLDSPRMWMQMADSMMLDETMTFVYEYGEDMPSDSLWDP 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0534 174 Pfam AP2 domain 16 64 IPR001471 GO:0003700|GO:0006355
Lele31g0534 174 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 12 132 - -
Lele31g0534 174 SMART rav1_2 15 78 IPR001471 GO:0003700|GO:0006355
Lele31g0534 174 PRINTS Ethylene responsive element binding protein signature 54 74 IPR001471 GO:0003700|GO:0006355
Lele31g0534 174 PRINTS Ethylene responsive element binding protein signature 16 27 IPR001471 GO:0003700|GO:0006355
Lele31g0534 174 CDD AP2 16 74 IPR001471 GO:0003700|GO:0006355
Lele31g0534 174 ProSiteProfiles AP2/ERF domain profile. 15 72 IPR001471 GO:0003700|GO:0006355
Lele31g0534 174 Gene3D AP2/ERF domain 15 73 IPR036955 GO:0003700|GO:0006355
Lele31g0534 174 SUPERFAMILY DNA-binding domain 14 73 IPR016177 GO:0003677
Lele31g0534 174 FunFam Ethylene-responsive transcription factor 2 14 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0534 Lele-ChrLele31 13300770 13301294 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0534 14 174 AP2-EREBP Transcription Factor Family AT1G71450 64.024 4.36e-64 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele31g0534 AP2 7.2e-13 CL0081