Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0533 ATGGAAGAAGAAGCGAACTGCAACGCACAAGGATGTGGCATGGCTCCTCCGGCTCCAGCATCGTCGTCTTATCGGGGAGCTCGAAAGCGAAAATGGGGCAAATGGGTGTCGGAAATCCGTGAGCCCGGCAAGAAAACTCGTATATGGTTAGGAAGCTATGAAGCACCAGAAATGGCGGCAGCGGCGTATGATGTTGCAGCGTCACACTTCCGAGGACCGTCGGCACGACTCAACTTCCCGGAGTTCTTAGGAGCTCTTCCACGGCCGGAGAGCTCTCAAGTGGAGGATGTAAGGTTCGCAGCTCAACAAGCGGCATCAATGTTCAGAAGACGACCATTAAGATCATGTCAATCACCAGGTGATGAGGCCCAAGGCGGCGTCATGGTTCCGGCAGCCACCGTGGGGCCGTTTCCAGCGAGCCAGATCGATGCCATAAATGAGTCACCATTGGATGATTCACCAAAGATGTGGATGCAAATGGTTGAAGCGTTCTTATTAGGGTTTGATGAGTCTATAGCATTATATAACGATGACGACGAGGGCGATTTGGAACTGAGAAGATGGGAAGAAATACTGAATGATCCAATGTGGGATTTCTGA 600 0.5133 MEEEANCNAQGCGMAPPAPASSSYRGARKRKWGKWVSEIREPGKKTRIWLGSYEAPEMAAAAYDVAASHFRGPSARLNFPEFLGALPRPESSQVEDVRFAAQQAASMFRRRPLRSCQSPGDEAQGGVMVPAATVGPFPASQIDAINESPLDDSPKMWMQMVEAFLLGFDESIALYNDDDEGDLELRRWEEILNDPMWDF 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0533 199 MobiDBLite consensus disorder prediction 1 28 - -
Lele31g0533 199 FunFam Ethylene-responsive transcription factor 2 22 81 - -
Lele31g0533 199 Pfam AP2 domain 23 72 IPR001471 GO:0003700|GO:0006355
Lele31g0533 199 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 21 117 - -
Lele31g0533 199 SMART rav1_2 23 86 IPR001471 GO:0003700|GO:0006355
Lele31g0533 199 ProSiteProfiles AP2/ERF domain profile. 23 80 IPR001471 GO:0003700|GO:0006355
Lele31g0533 199 CDD AP2 22 81 IPR001471 GO:0003700|GO:0006355
Lele31g0533 199 PRINTS Ethylene responsive element binding protein signature 62 82 IPR001471 GO:0003700|GO:0006355
Lele31g0533 199 PRINTS Ethylene responsive element binding protein signature 24 35 IPR001471 GO:0003700|GO:0006355
Lele31g0533 199 SUPERFAMILY DNA-binding domain 22 80 IPR016177 GO:0003677
Lele31g0533 199 Gene3D AP2/ERF domain 23 81 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0533 Lele-ChrLele31 13284723 13285322 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0533 9 198 AP2-EREBP Transcription Factor Family AT1G71450 42.632 2.00e-41 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele31g0533 AP2 3.6e-10 CL0081