Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0530 ATGTTTCTGCATAGAAACTCCATAGCTCTGTTGGTGATTCCCATTATTGCTGTTTTTGCATATTTCCTTGTCGTACATGAGACTAATGGAAACGAGCAGTTGTTTCTGGGTGATTTATTGTCCTCTTTCTCTTTGAATCATGGTCATCACCCTCGTCGTTATCATCATCATCATCATTCTCACAAGAAACGACCTGATAACAGCAGCAGTGAGATTAGCAATAGATGTGATGATTTTCCGCCGGGAATTCCGCCGCCGAACACCAACACGACGACGTATCTATGTGTGGATCGACGAGGTTGCTGCAACTTCACAACCGTGCAAGCAGCTGTGAACGCTGTCCCAGATTTCAGCGATAAGAGAAATATTATATGGATTAACAGTGGCCTTTATTATGAGAAAGTGATGGTGCTATGGAGCAAACCAAACATCACATTTCAAGGGCAAGGCTACACTTCAACGGCCATTGCTTGGAACGACACTGCCAAGTCAGCAAACGGCACATTCTATAGTGGCTCCGTACAAGTATTCGCCAACAACTTCATTGCCAAAAACATAAGCTTCATGAATGTGGCGCCAATTCCAGGTCCTGGGGTAGAAGGAGCACAAGCAGTGGCCATAAGAATAGGGGGTGATAAGGCTCAATTCTGGGGATGTGGCTTTTTTGGAGCACAAGATACTCTTCATGATGATGGGGGTCGCCATTACTTTAGGGATTGCTATATTCAAGGCTCCATTGATTTCATTTTTGGCGATGCCAGGTCTCTCTACGAGAATTGTCAACTAGTGTCAATGGCGAACCCAGTACCGCCGGGACAAAGGTTCATAAACGGCGCCGTTACAGCTCATGGGAGGACATCAAACGAGGAAAACACAGGCTTTGCTTTTGTAAACTGTAGCATTGGAGGGTACGGAAGAATATGGTTAGGTCGGGCATGGCGTCCTTTCTCTCGTGTCGTTTTTGCCTATACGACAATGTCCGATATCATTGCCCCTGAAGGTTGGAATGACTTCAAAGACCCTGCCAGAGATCAGACAGTATTCTATGGAGAATACAACTGCACAGGGCCAGGGGCTAATATGAATATGAGGGCACCATATGTACAGAGATTAAACGATGCAATTGCTTCTCCTTTCCTCAACACATCATTCATTGATGGAGACCAATGGCTTCTCCCTTCCAAATAA 1188 0.4529 MFLHRNSIALLVIPIIAVFAYFLVVHETNGNEQLFLGDLLSSFSLNHGHHPRRYHHHHHSHKKRPDNSSSEISNRCDDFPPGIPPPNTNTTTYLCVDRRGCCNFTTVQAAVNAVPDFSDKRNIIWINSGLYYEKVMVLWSKPNITFQGQGYTSTAIAWNDTAKSANGTFYSGSVQVFANNFIAKNISFMNVAPIPGPGVEGAQAVAIRIGGDKAQFWGCGFFGAQDTLHDDGGRHYFRDCYIQGSIDFIFGDARSLYENCQLVSMANPVPPGQRFINGAVTAHGRTSNEENTGFAFVNCSIGGYGRIWLGRAWRPFSRVVFAYTTMSDIIAPEGWNDFKDPARDQTVFYGEYNCTGPGANMNMRAPYVQRLNDAIASPFLNTSFIDGDQWLLPSK 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0530 395 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 82 391 - -
Lele31g0530 395 Gene3D - 87 394 IPR012334 -
Lele31g0530 395 FunFam Pectinesterase 88 395 - -
Lele31g0530 395 Pfam Pectinesterase 96 388 IPR000070 GO:0030599|GO:0042545
Lele31g0530 395 MobiDBLite consensus disorder prediction 51 84 - -
Lele31g0530 395 ProSitePatterns Pectinesterase signature 2. 242 251 IPR033131 -
Lele31g0530 395 SUPERFAMILY Pectin lyase-like 92 392 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0530 Lele-ChrLele31 13269166 13271885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0530 64 391 Carbohydrate Esterase AT1G05310 69.512 0.0 506