Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele31g0527 | ATGGCGAAGACATCCCAACCCTCTATTAAGAACTTCAAGGATATGTGGTTTCCTGAGCCGATTTTGAAGAAGTTGAAAGAAAAAGGGATTGTTCAACCAACACCTATCCAAGTACAAGGCCTTCCCGTGATCTTATCGGGGAGGGATATGATTGGGATTGCATTCACAGGATCGGGGAAAACTCTAGTCTTTGTTTTGCCAATGATCATGATGGCAGTGCAAGAGGAAATTATGATGCCCATTGTTCCAGGAGAAGGTCCATTTGGTTTGATTATTTGCCCATCAAGGGAACTAGCTAGACAGACTTATGAAGTAGTTGAACAATTCTTAATACCTCGAGAGAAGCTGGATATCCTGAGCTCAGGCCATTGCTTTGTATTGGTTAAAGGATATGTTAGCAAAGAAAAAAAAATGAATCTTGATAATTGCAGAATTTCGCTAGAAGCGGCAGCGAATCTTGACGTAATCCAGGAGGTAGAGTATGTTAAGCAAGAGGCGAAAATAGTGTATCTCCTTGAGTGCCTGCAAAAAAACCCACCTCCAGTTTTAATATTCTGTGAAAATGAGGCTGATGTGGATGATATTCATGAATATCTTCTCGTGAAAGGAGTGGAAGCGGTGGCTATTCATGGAGGCAAAGATCAGGAAGAGAGAGAGTATGCAATTGCAGCCTTTAAGGCTGGAAAGAAAGATGTGCTGGTTGCAACTGATGTTGCATCCAAGGGGTTGGATTTTCCTGATATTCAGCATGTTATTAACTATGAAATGCCTGCAGAAATTGAGAACTATGTTCATAACATTGGACGAACCGGACGATGTGGCAAGACTGGCATAGCTACGACGTTCATTAACAAGAATCAAACCGAGACGACCTTGCTTGACTGA | 885 | 0.4192 | MAKTSQPSIKNFKDMWFPEPILKKLKEKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPMIMMAVQEEIMMPIVPGEGPFGLIICPSRELARQTYEVVEQFLIPREKLDILSSGHCFVLVKGYVSKEKKMNLDNCRISLEAAANLDVIQEVEYVKQEAKIVYLLECLQKNPPPVLIFCENEADVDDIHEYLLVKGVEAVAIHGGKDQEEREYAIAAFKAGKKDVLVATDVASKGLDFPDIQHVINYEMPAEIENYVHNIGRTGRCGKTGIATTFINKNQTETTLLD | 294 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele31g0527 | 294 | CDD | SF2_C_DEAD | 155 | 283 | - | - | |
Lele31g0527 | 294 | Pfam | Helicase conserved C-terminal domain | 167 | 274 | IPR001650 | - | |
Lele31g0527 | 294 | PANTHER | ATP-DEPENDENT RNA HELICASE DBP3 | 9 | 136 | - | - | |
Lele31g0527 | 294 | Gene3D | - | 1 | 153 | IPR027417 | - | |
Lele31g0527 | 294 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 154 | 294 | IPR001650 | - | |
Lele31g0527 | 294 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 47 | 287 | IPR027417 | - | |
Lele31g0527 | 294 | SMART | ultradead3 | 29 | 290 | IPR014001 | - | |
Lele31g0527 | 294 | Gene3D | - | 154 | 294 | IPR027417 | - | |
Lele31g0527 | 294 | SMART | helicmild6 | 193 | 274 | IPR001650 | - | |
Lele31g0527 | 294 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 41 | 185 | IPR014001 | - | |
Lele31g0527 | 294 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 10 | 38 | IPR014014 | GO:0003724 | |
Lele31g0527 | 294 | Pfam | DEAD/DEAH box helicase | 34 | 121 | IPR011545 | GO:0003676|GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele31g0527 | Lele-ChrLele31 | 13244341 | 13245431 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele31g0527 | 49 | 283 | Eukaryotic Initiation Factors Gene Family | AT5G11170 | 26.398 | 1.45e-21 | 91.3 |