Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0527 ATGGCGAAGACATCCCAACCCTCTATTAAGAACTTCAAGGATATGTGGTTTCCTGAGCCGATTTTGAAGAAGTTGAAAGAAAAAGGGATTGTTCAACCAACACCTATCCAAGTACAAGGCCTTCCCGTGATCTTATCGGGGAGGGATATGATTGGGATTGCATTCACAGGATCGGGGAAAACTCTAGTCTTTGTTTTGCCAATGATCATGATGGCAGTGCAAGAGGAAATTATGATGCCCATTGTTCCAGGAGAAGGTCCATTTGGTTTGATTATTTGCCCATCAAGGGAACTAGCTAGACAGACTTATGAAGTAGTTGAACAATTCTTAATACCTCGAGAGAAGCTGGATATCCTGAGCTCAGGCCATTGCTTTGTATTGGTTAAAGGATATGTTAGCAAAGAAAAAAAAATGAATCTTGATAATTGCAGAATTTCGCTAGAAGCGGCAGCGAATCTTGACGTAATCCAGGAGGTAGAGTATGTTAAGCAAGAGGCGAAAATAGTGTATCTCCTTGAGTGCCTGCAAAAAAACCCACCTCCAGTTTTAATATTCTGTGAAAATGAGGCTGATGTGGATGATATTCATGAATATCTTCTCGTGAAAGGAGTGGAAGCGGTGGCTATTCATGGAGGCAAAGATCAGGAAGAGAGAGAGTATGCAATTGCAGCCTTTAAGGCTGGAAAGAAAGATGTGCTGGTTGCAACTGATGTTGCATCCAAGGGGTTGGATTTTCCTGATATTCAGCATGTTATTAACTATGAAATGCCTGCAGAAATTGAGAACTATGTTCATAACATTGGACGAACCGGACGATGTGGCAAGACTGGCATAGCTACGACGTTCATTAACAAGAATCAAACCGAGACGACCTTGCTTGACTGA 885 0.4192 MAKTSQPSIKNFKDMWFPEPILKKLKEKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPMIMMAVQEEIMMPIVPGEGPFGLIICPSRELARQTYEVVEQFLIPREKLDILSSGHCFVLVKGYVSKEKKMNLDNCRISLEAAANLDVIQEVEYVKQEAKIVYLLECLQKNPPPVLIFCENEADVDDIHEYLLVKGVEAVAIHGGKDQEEREYAIAAFKAGKKDVLVATDVASKGLDFPDIQHVINYEMPAEIENYVHNIGRTGRCGKTGIATTFINKNQTETTLLD 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0527 294 CDD SF2_C_DEAD 155 283 - -
Lele31g0527 294 Pfam Helicase conserved C-terminal domain 167 274 IPR001650 -
Lele31g0527 294 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 9 136 - -
Lele31g0527 294 Gene3D - 1 153 IPR027417 -
Lele31g0527 294 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 154 294 IPR001650 -
Lele31g0527 294 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 287 IPR027417 -
Lele31g0527 294 SMART ultradead3 29 290 IPR014001 -
Lele31g0527 294 Gene3D - 154 294 IPR027417 -
Lele31g0527 294 SMART helicmild6 193 274 IPR001650 -
Lele31g0527 294 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 41 185 IPR014001 -
Lele31g0527 294 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 10 38 IPR014014 GO:0003724
Lele31g0527 294 Pfam DEAD/DEAH box helicase 34 121 IPR011545 GO:0003676|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0527 Lele-ChrLele31 13244341 13245431 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0527 49 283 Eukaryotic Initiation Factors Gene Family AT5G11170 26.398 1.45e-21 91.3