Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0481 ATGGCCCGACATAAAATTTTTATATTCTTTCTCCTTCTTCCTACTTGCCTAGTTCTTTTGTCACTATGCTCCATCACTTCAGGACTCACAGAAACTGAAGCTCTTCTCAAGTGGAAACAGAGTATCCCAAACCAACCAATTTTGGATTCATGGGTTTCTCCACCACAAGCTAATAACTCTAGTGGATCAGCTCAAACCCCATGTTCATGGAGTGGAATTAGCTGTGATTCTTCAGGGAGCGTGATTGAACTGAACCTGAACAATACTGGTCTTGAAGGTACCATTGAAAACTTGAACTTCTCAGCATTAGCAAATCTTCTTATTCTTAATCTTCAGTATAACAAACTCAGTGGCAGTATCCCAGAAAGCATTGGAGTTCTCTCAAAGCTTCAATTTCTATCTCTAGATGGAAACAACTTTTCTGGGTCTATACCACAATCTCTAGGTAACTGTACAAATCTAAGTGTTCTCTCAGTGGCTTTAAACCATCTCTCAGGCATAATTCCACCTAGTATTGGTACATTGAACAATCTAACTGTTGTTCGCTTTCATCGAAACCATTTACATGGGGATTTGCCACAAGAGTTTGGGAATGTTTCATCTTTGATTGTTGTTCATCTATCTTATAACAACTTCAGTGGCCATTTACCACCTCAATTGTGTAAAGGTGGTAAGCTTGTGAATTTCACTGCAGCTTATAATAGTCTCTCTGGTCCAATCCCAATAAGTTTGAGAAACTGTTCATCTTTATACAGAGTTCAACTTCAACATAATCAATTAACAGGTTATGCAGATCAGGATTTTGGAGTTTATCCTAATCTCACTTACATTGACATCAGTTTCAACAGAGTTCAAGGTGAGCTCTCTGCAAATTGGGGTGCCAGCAAAAGCTTAGAAGCTCTTATCATGGCTGGCAATTCAATCAAGGGGAATATTCCAGGTGATATATTTCAATTGAAACAACTACAAGAACTTGACTTGTCATTGAACAATATATCGGGCGAGATTCCAACACAAATCAGAATTAATGCCTCCATGTTATATCTTCTAAAGTTAAACAGAAACAATATTTCTGGTATGATACCTACAAGCTTTGGAAGTCTTTCTAATTTAGAGTCATTAGACCTGTCAATGAATAGGCTTGGTGGACCTATCCCTTATCAATTAGGGAATTGGTACAAGTTGCTCAATTTAAATTTGAGTCATAATGACTTCAATGGCCAAATCCCATATCAAATTGGGAATCTTGAGTCCTTACAAGATTTTTTGGACTTGAGTTTTAATTCACTTTCTGGAGAAATCCCTGTTGATCTTAGTAAGCTCAACAACTTGATGAATCTGAATCTGTCTCATAATAATCTATCAGGTTCTGTCCCTGATTCCCTTGGTACAATGTTGAGCTTGTCAAGCATCAACCTCTCTTACAACAATTTAGAGGGTGCTGTTCCAAACAATGGCATATTTAATAGTTCTTATTCATTAGATTTGAGTAATAACAAAGATTTATGTGGGAGAATGCAAGGTTTGAGACTTTGCAATGTTTCAATATCACATGAGGGAAGCAACAAAGAGAACGTTGTGATATCTATTGTTGCTTCTTTAGCTGGTGTACTACTTGTTTCATTGGTGTTAGTTGGGATTATTGTTATTTGTTCAAAAAGAAACTCATCAAGAATTTTAGAACGGAACAATTCAGGAACCAAGAAAGAAAGTCCATTTTCAATTGTTCATTTTGATGGAAAAAATCTGTATGATGACATAATTGAAGCAACTGAGAACTTTGATGACAAGTATTGTATAGGGGAAGGAGCTTCTGGTAAAGTTTACAAAATGGTCATGCAAGGAGGTGAACAATTTGCTATAAAGAAGTTTAGATGTGAAGAAGAAGACGATGACTTATTGGACATTGAAAGTATAAAAGCCTTCAAGAGTGAGATTGAAGCTATGACAGAAATCCGCCATAGAAACATTGTGAAACTCTATGGATTTTGCTCACAAAGATCACACACTTTTGCTGTTTATGAGTACATGGAAGGAGGGTCTTTAGCTGATTTTCTGAAAAATGACACAAAGGCATTACAGTTAGATTGGCCTAAGAGGGTGGATATTGTCAAAGGCGTGGCACATGCTTTGTCTTATATGCATCATGATTGTGACCCACCAATTATTCATAGAGACATATCAAGCAAAAATATATTATTGTCTGCAAATCTTGAAGCCCATGTCTCAGATTTTGGCACAGCGAGGTTCTTGAAGGCTAACTCATCAATTTGGACAACATTTGCTGGCACACATGGCTATGCTGCTCCAGAGCTAGCATATTCAATGGCAGTGTCTGAGAAATGTGATGTGTTTAGCTTTGGTGTATTGGCATTTGAGATTATCATGGGGAAGCATCCTAGTGATATAATTTCTCATGTACAATCCAATATCGATGTTCTAAACATGAACTTCAATGAGATTTTAGACCGACGTCTATCACCTCCTAAAGAGCAGCAAAAGTTGAAGGAAGTGATTTTGATTGCAAATCTTGCTATTTCTTGTTTACAAACCCACCCTTCATCTAGACCAACCATGCGCAGCATCACTGATCAAATGGGTTAA 2604 0.3725 MARHKIFIFFLLLPTCLVLLSLCSITSGLTETEALLKWKQSIPNQPILDSWVSPPQANNSSGSAQTPCSWSGISCDSSGSVIELNLNNTGLEGTIENLNFSALANLLILNLQYNKLSGSIPESIGVLSKLQFLSLDGNNFSGSIPQSLGNCTNLSVLSVALNHLSGIIPPSIGTLNNLTVVRFHRNHLHGDLPQEFGNVSSLIVVHLSYNNFSGHLPPQLCKGGKLVNFTAAYNSLSGPIPISLRNCSSLYRVQLQHNQLTGYADQDFGVYPNLTYIDISFNRVQGELSANWGASKSLEALIMAGNSIKGNIPGDIFQLKQLQELDLSLNNISGEIPTQIRINASMLYLLKLNRNNISGMIPTSFGSLSNLESLDLSMNRLGGPIPYQLGNWYKLLNLNLSHNDFNGQIPYQIGNLESLQDFLDLSFNSLSGEIPVDLSKLNNLMNLNLSHNNLSGSVPDSLGTMLSLSSINLSYNNLEGAVPNNGIFNSSYSLDLSNNKDLCGRMQGLRLCNVSISHEGSNKENVVISIVASLAGVLLVSLVLVGIIVICSKRNSSRILERNNSGTKKESPFSIVHFDGKNLYDDIIEATENFDDKYCIGEGASGKVYKMVMQGGEQFAIKKFRCEEEDDDLLDIESIKAFKSEIEAMTEIRHRNIVKLYGFCSQRSHTFAVYEYMEGGSLADFLKNDTKALQLDWPKRVDIVKGVAHALSYMHHDCDPPIIHRDISSKNILLSANLEAHVSDFGTARFLKANSSIWTTFAGTHGYAAPELAYSMAVSEKCDVFSFGVLAFEIIMGKHPSDIISHVQSNIDVLNMNFNEILDRRLSPPKEQQKLKEVILIANLAISCLQTHPSSRPTMRSITDQMG 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0481 867 SUPERFAMILY RNI-like 168 504 - -
Lele31g0481 867 Pfam Protein kinase domain 597 864 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0481 867 Gene3D Transferase(Phosphotransferase) domain 1 677 867 - -
Lele31g0481 867 FunFam MDIS1-interacting receptor like kinase 2 677 867 - -
Lele31g0481 867 PANTHER LEUCINE RICH REPEAT KINASE 2 57 201 - -
Lele31g0481 867 SUPERFAMILY L domain-like 80 194 - -
Lele31g0481 867 PRINTS Leucine-rich repeat signature 368 381 - -
Lele31g0481 867 PRINTS Leucine-rich repeat signature 322 335 - -
Lele31g0481 867 Gene3D Ribonuclease Inhibitor 29 190 IPR032675 -
Lele31g0481 867 FunFam Nuclear pore complex protein NUP107 29 193 - -
Lele31g0481 867 Pfam Leucine rich repeat N-terminal domain 31 76 IPR013210 -
Lele31g0481 867 ProSiteProfiles Protein kinase domain profile. 594 867 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0481 867 SMART LRR_typ_2 127 151 IPR003591 -
Lele31g0481 867 SMART LRR_typ_2 368 392 IPR003591 -
Lele31g0481 867 SMART LRR_typ_2 319 343 IPR003591 -
Lele31g0481 867 SMART LRR_typ_2 441 464 IPR003591 -
Lele31g0481 867 SMART LRR_typ_2 465 490 IPR003591 -
Lele31g0481 867 SMART LRR_typ_2 175 198 IPR003591 -
Lele31g0481 867 SMART LRR_typ_2 103 125 IPR003591 -
Lele31g0481 867 SMART LRR_typ_2 199 223 IPR003591 -
Lele31g0481 867 Gene3D Phosphorylase Kinase; domain 1 555 676 - -
Lele31g0481 867 FunFam Leucine-rich repeat receptor protein kinase MSP1 557 676 - -
Lele31g0481 867 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 203 516 - -
Lele31g0481 867 Gene3D Ribonuclease Inhibitor 191 513 IPR032675 -
Lele31g0481 867 ProSitePatterns Tyrosine protein kinases specific active-site signature. 722 734 IPR008266 GO:0004672|GO:0006468
Lele31g0481 867 ProSitePatterns Protein kinases ATP-binding region signature. 600 623 IPR017441 GO:0005524
Lele31g0481 867 SUPERFAMILY Protein kinase-like (PK-like) 572 863 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0481 Lele-ChrLele31 12816821 12820078 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0481 83 770 Receptor kinase-like Gene Family AT4G08850 45.035 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele31g0481 Pkinase 8.3e-50 CL0016