Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0478 ATGAACAATAACAGAACTGATGCTTACCTTGCAGTTCAAGCTACATGTGTGATTTTCTTGGCACTTTGTGTTTTAACTTCTGGAGAGACAGAAACAGAGGCCCTTCTCAAGTGGAAACAGAGTCTGCCAAATCAACCAATTCTGGAGTCATGGGTCTCAAGTGCAGCTCAAAGCCCATGTTCATGGCGTGGAATAGCATGTGATAATTCCTCAGGAAGTGTGATTGCAATAAACTTGGCTTACACTGGTCTTGAAGGTACCCTCCAAAACTTGAACTTCTCTGCATTTCCAAATCTTCTCCGCCTCGATCTCAAAACCAACAACCTCGTCGGTAGCATACCAGAAAACATTGGTGTGCTTTCTAAACTGCAATACCTTGACCTTTCTACAAATAGCCTCAATGGCACTTTACCTCTTTCTCTTGCTGATTTGACTCAAGTTTATGAGCTCGATGTTTCACGAAACAACATCACCGGGATATTAGACCCTCGTCTTTTTCCTGATGGTTCTGATCAACCCAAGATAGGATTGATAGGAATCAGAAGACTTCTCTTTCAGGACAACCTGCTTGGTGGTAGAATTCCAGATGAAATAGGGAATATAAGAAATTTAACTGTGATAGCATTAGATGGGAATAGCTTCTATGGTCCTATTCCCTCGTCTCTAGGGAATTGTACACATTTAAGTGTTCTTAGGATGTCTGGAAACAAGCTCTCAGGCATGCTTCCTCCTAGTTTTGGTAGATTGACTAATCTATCTGAGGTGTTCCTTCACATAAATAATTTACAGGGTCCTGTTCCACGAGACTTAGGAAACTCTTCTTCTTTAACTGTCCTTCATCTTGCTGAAAACAACTTCACAGGAGAGTTACCGTCGCAAGTTTGCAAAGGTGGCAAGCTTGTGAATTTCAGTGCTTCATACAATAGTTTCACTGGCCCAATCCCAGTAAGCCTGAGAGATTGCACATCCTTGTATAGGGTTCGGTTGGAAAATAACCAACTAAGGGGTTATGCAGATCAAGATTTTGGTGTGTATCCTAATCTTACTTACATGGACTTCAGCTACAATAATGTGCAAGGTGAGCTCTCTTCAAATTGGGGAAACTGCAAAAACTTGCAATATCTTAGTATGTCTGGAAACTCAATAGGCGGTACTATACCTGATGAGATTTTTCAACTGAATCAACTTGTAGAGCTACATCTGTCTTCCAATCAAATATCAGGAGAGATTCCCCAACAAATAGGGAATTCCTCTAGCCTTTACTCTCTATCTTTGAGTAACAACAAAATTTCAGGATTGATACCGGCAAGCATTGGGAAGTTGTCGAATTTGCGAAAATTAGACTTATCATCAAACATGCTAAGAGGACCAATCCCTTATCAGATAGGGGATTTCTCAAACTTGCTGACTTTAAATTTGAGCAATAATGACTTGAATGGAACAATCCCATACCAAATTGGAAATCTGGCAGCCTTACAAGATTTGTTGGATTTCAGTTACAATTCACTTTATGGCCAAATTCCAGCTGATCTTAGCAAGCTGAAAAATTTGATAAGCTTGAATATCTCTCACAACAATCTTTCTGGTTCTATCCCTGATTCCCTTGGTGAAATGTTGAGTTTGTCAAGTGTCAACATCTCCTACAACAATTTGGAGGGTCCTATACCGAATAGTGGCATATTTAATTCTTCATATCCCGTCGATTTGCGTAACAACAAAGAGTTATGCGGGAATATACAAGGGCTGCAACCTTGCAATGTCTCGTACATGGAACCTAAAGGTGGAAGCAACAAAAAGAAAGTTATAGTAGCCATTGTTGCTTCTTTGGGAGGTGCACTACTTGTTTCGTCATTGTTAGTTTGCATTTTTGTTTTTGGCTGTAAGAGAAGATCTATGCAACAGAATTCTGCACCGGAGAGAAAAAGCCAATTTTCGATATCGTATTTCAATGGAAGAATTGTTTATGAAGACATAATTGAAGCCACTAAGAACTTCGATGATACCTACTGCATCGGAGAGGGAACATTAGGAAAAGTTTACAGAGTGGTGCTTCCAGGAGGTCAAGTAGTTGCTATAAAAAAGTTAAGATGTGAGGAAGACAACTTAGACGTTGAAAGCATAAAATCCTTTAAAAGTGAGATAGAAGCCATGACCGAAACACGTCACCGGAACATTGTGAAGTTGTATGGGTTTTTCTCAGACCCCTCGCACACGTTTTTGATTTATGAGTACATGGAGAGAGGGAATTTAAATTATATGCTGAGAGATGACGAAAAAGCTACTGAACTAGATTGGCCAAAGAGAGTTGGAATTGTTAAAGGAGTAGCACAAGCTTTATCTTACATGCATCATGATTGCAATCCACCAATAATCCACAGAGACATATCAAGCAAGAATGTATTATTGTCCAAAAATTTGGAAGCTCATGTTTCAGATTTTGGCACAGCAAGGTTCCTGAAGGCAGATTCACGGATTTGGACTTCCTTTGCAGGCACATATGGCTATGCAGCTCCAGAGCTTGCGTACACAAAGGCAGTGACTGAAAAATGTGATGTGTTTAGCTTCGGTGTTTTGGCTTTTGAGATTCTCACAGGAAATCATCCAGGAGATCTAATTTCCCACATACAAACATATGGTGCTCAAAACATCAACTTCAAGGAGATTTTAGACCCACGTCTTTCACCTCCTACAAAGCAAGAAAAATTGAAGGAATTGGCTTTGATTAGTAATCTAGCTATTTCTTGTTTACAGACAAACCCTCAATCACGACCAACTATGCGAAGCATAACTCACATGATTGACATGGAGATTGCTCATGATTCATGA 2826 0.3984 MNNNRTDAYLAVQATCVIFLALCVLTSGETETEALLKWKQSLPNQPILESWVSSAAQSPCSWRGIACDNSSGSVIAINLAYTGLEGTLQNLNFSAFPNLLRLDLKTNNLVGSIPENIGVLSKLQYLDLSTNSLNGTLPLSLADLTQVYELDVSRNNITGILDPRLFPDGSDQPKIGLIGIRRLLFQDNLLGGRIPDEIGNIRNLTVIALDGNSFYGPIPSSLGNCTHLSVLRMSGNKLSGMLPPSFGRLTNLSEVFLHINNLQGPVPRDLGNSSSLTVLHLAENNFTGELPSQVCKGGKLVNFSASYNSFTGPIPVSLRDCTSLYRVRLENNQLRGYADQDFGVYPNLTYMDFSYNNVQGELSSNWGNCKNLQYLSMSGNSIGGTIPDEIFQLNQLVELHLSSNQISGEIPQQIGNSSSLYSLSLSNNKISGLIPASIGKLSNLRKLDLSSNMLRGPIPYQIGDFSNLLTLNLSNNDLNGTIPYQIGNLAALQDLLDFSYNSLYGQIPADLSKLKNLISLNISHNNLSGSIPDSLGEMLSLSSVNISYNNLEGPIPNSGIFNSSYPVDLRNNKELCGNIQGLQPCNVSYMEPKGGSNKKKVIVAIVASLGGALLVSSLLVCIFVFGCKRRSMQQNSAPERKSQFSISYFNGRIVYEDIIEATKNFDDTYCIGEGTLGKVYRVVLPGGQVVAIKKLRCEEDNLDVESIKSFKSEIEAMTETRHRNIVKLYGFFSDPSHTFLIYEYMERGNLNYMLRDDEKATELDWPKRVGIVKGVAQALSYMHHDCNPPIIHRDISSKNVLLSKNLEAHVSDFGTARFLKADSRIWTSFAGTYGYAAPELAYTKAVTEKCDVFSFGVLAFEILTGNHPGDLISHIQTYGAQNINFKEILDPRLSPPTKQEKLKELALISNLAISCLQTNPQSRPTMRSITHMIDMEIAHDS 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0478 941 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Lele31g0478 941 SUPERFAMILY RNI-like 242 558 - -
Lele31g0478 941 SMART LRR_typ_2 144 168 IPR003591 -
Lele31g0478 941 SMART LRR_typ_2 274 297 IPR003591 -
Lele31g0478 941 SMART LRR_typ_2 393 417 IPR003591 -
Lele31g0478 941 SMART LRR_typ_2 441 464 IPR003591 -
Lele31g0478 941 SMART LRR_typ_2 514 538 IPR003591 -
Lele31g0478 941 SMART LRR_typ_2 120 143 IPR003591 -
Lele31g0478 941 SMART LRR_typ_2 249 273 IPR003591 -
Lele31g0478 941 SMART LRR_typ_2 465 489 IPR003591 -
Lele31g0478 941 ProSiteProfiles Protein kinase domain profile. 665 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0478 941 SMART serkin_6 665 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0478 941 Gene3D Ribonuclease Inhibitor 173 295 IPR032675 -
Lele31g0478 941 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 273 589 - -
Lele31g0478 941 SUPERFAMILY Protein kinase-like (PK-like) 641 932 IPR011009 -
Lele31g0478 941 Pfam Leucine rich repeat 395 454 IPR001611 GO:0005515
Lele31g0478 941 FunFam Leucine-rich repeat receptor protein kinase EMS1 175 269 - -
Lele31g0478 941 ProSitePatterns Tyrosine protein kinases specific active-site signature. 790 802 IPR008266 GO:0004672|GO:0006468
Lele31g0478 941 Gene3D Phosphorylase Kinase; domain 1 626 744 - -
Lele31g0478 941 FunFam Leucine-rich repeat receptor protein kinase MSP1 628 744 - -
Lele31g0478 941 SUPERFAMILY L domain-like 48 334 - -
Lele31g0478 941 Gene3D Ribonuclease Inhibitor 297 588 IPR032675 -
Lele31g0478 941 Pfam Protein kinase domain 670 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0478 941 Gene3D Transferase(Phosphotransferase) domain 1 745 940 - -
Lele31g0478 941 PANTHER LEUCINE RICH REPEAT KINASE 2 222 935 - -
Lele31g0478 941 Pfam Leucine Rich Repeat 516 536 IPR001611 GO:0005515
Lele31g0478 941 PRINTS Leucine-rich repeat signature 441 454 - -
Lele31g0478 941 PRINTS Leucine-rich repeat signature 123 136 - -
Lele31g0478 941 Gene3D Ribonuclease Inhibitor 27 168 IPR032675 -
Lele31g0478 941 FunFam MDIS1-interacting receptor like kinase 2 745 939 - -
Lele31g0478 941 FunFam Nuclear pore complex protein NUP107 28 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0478 Lele-ChrLele31 12783685 12787131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0478 12 838 Receptor kinase-like Gene Family AT4G08850 41.720 0.0 657
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele31g0478 Pkinase 6.5e-50 CL0016