Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0477 ATGTTTCTATGTCATTTCACTTTAGGAATTACTGAATCTGAAGCTCTGATCAAATGGAAGCAAAGTCTCCCACACCAACCAATATTGGATTCATGGGTCCTTCCACCTTTCAACAACACTAAATCAGTTCAAAGCCCATGCTCATGGCGTGGAATAACTTGTGATAATTCTACAGGAAGTGTGATCGGAATAAACTTGGCTGAAACTGGTCTTGAAGGTACCCTTCAAAACTTGAACTTGTTTGCATTTCCAAATCTTCTTCACCTTGATCTCAACACAAACAACCTCACTGGTAGCATACCAGAAAACATTGGGGTCCTCTCTAAACTACAATTCCTTGACCTTTCTTCTAATCTCCTCAATGGCACTTTACCTCTTTCTCTTGCAAATTTGACTCAAGTTTATGAACTTGATGTTTCCAGAAACCCCATAACTGGGACCTTAGACCCACGTCTTTTCCCAGATGGTTCTGATCAACCCAAGATTGGATTGATTGGGATTAGAAATCTTCTCTTTCAAGACACCAAGCTTGGTGGTAGAATTCCAGATGAACTAGGGAACATAAGCAATTTAACTGTGTTAGCTCTAGATGGGAATAGCTTCTATGGCCCTATTCCTCCATCTCTTGGAAACTGTTCACATTTAGGTGTTCTTAGGATGTCTGAAAACCAACTCTCAGGCATGATTCCCCCCAGTATTGGTAGATTGAGTAATCTATCTGATGTGCGCTTCCTCATGAATAATTTCTACAATAGGATACAAGGTAAGCTTTCTGCAAATTGGGGTGCTTGCAAGAACTTGCAATCTCTTATCTTGGCCGGAAACTCAATCAGCGGAACTATACCGGCTGACATATTTCAATTGAATCAATTAGAAGAGCTTGATCTATCTTCCAATCAAATATCTGGAGAGATTCCTCCCCAAATAGGGAATTTCTCTAGAATTTCTGTTCTATCTTTGAGTAGCAACAATCTGTCAGGATGCATACCAACTAGCATTGGGAAGTTGTCAAATTTGCAAACTTTAGACTTGTCGTCAAACATGCTAAGGGGACAAGTCCCTTCTCATATAGGAGATTGCTCAAACTTAATGCGTTTAAATTTGAGCAATAACCACTTCATTGGCAAAGTCCCGTATCAAATTGGAAATCTTAAATACTTACAAGATTTTGTGGACTTGAGCTATAATTCCCTATGTGGAGAAATCCCTGTGGATCTCAGTAAACTCAATAGCTTGATAAGCTTGAATGTTTCTCACAATAATTTGTCAGGTCCTATCCCTAATTCCCTAACAACAATGCAAAGCTTGTCAATCCTCAATCTCTCTTACAATAACCTAGAGGGGCCTATAAAGGAAAGTGGAATTTTTAATTATTCTAATCAAGTGGATTTGAATCACAACAAAAACTTATGTGGGAGGATCCAAGGTTTGAAACCTTGCAATGTGTCAATTTTAAAACCACTTGGAGAAGGTAATAAAAGGAAAATCATCATCCTAGTTGCTTCTTCTGTAGTAGGTGCAGTAATTGTTTTGTTGGGGCTACTTGGGATTTTTGTTATCAGTAGAAAAAGAAACTCAAGAGAGCTTGCATACACAATGGAAGTGACTGAGAAAGTAGATGTGTATAGCTTTGGTGTTTTGGCTATTGAGGCGCTTATGGGAGAGCATCCTGGTGATTTAATATCACGTATTCAAATGAATGGGATTAATCAGATCAGCTTCCAAGATATTCTGGACCCTCGCTTATCATCAACAAATGAGCAAAACTTGAAGAAATTGGCTTTGATTTGGAAAATAGCTCTTTCATGCTTACAAACCAACCCTCAATCTCGACCAACCATGAGAAGCATCGCCAACATGATTGAAATAGAGATTATTCATTGA 1884 0.3864 MFLCHFTLGITESEALIKWKQSLPHQPILDSWVLPPFNNTKSVQSPCSWRGITCDNSTGSVIGINLAETGLEGTLQNLNLFAFPNLLHLDLNTNNLTGSIPENIGVLSKLQFLDLSSNLLNGTLPLSLANLTQVYELDVSRNPITGTLDPRLFPDGSDQPKIGLIGIRNLLFQDTKLGGRIPDELGNISNLTVLALDGNSFYGPIPPSLGNCSHLGVLRMSENQLSGMIPPSIGRLSNLSDVRFLMNNFYNRIQGKLSANWGACKNLQSLILAGNSISGTIPADIFQLNQLEELDLSSNQISGEIPPQIGNFSRISVLSLSSNNLSGCIPTSIGKLSNLQTLDLSSNMLRGQVPSHIGDCSNLMRLNLSNNHFIGKVPYQIGNLKYLQDFVDLSYNSLCGEIPVDLSKLNSLISLNVSHNNLSGPIPNSLTTMQSLSILNLSYNNLEGPIKESGIFNYSNQVDLNHNKNLCGRIQGLKPCNVSILKPLGEGNKRKIIILVASSVVGAVIVLLGLLGIFVISRKRNSRELAYTMEVTEKVDVYSFGVLAIEALMGEHPGDLISRIQMNGINQISFQDILDPRLSSTNEQNLKKLALIWKIALSCLQTNPQSRPTMRSIANMIEIEIIH 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0477 627 Gene3D Ribonuclease Inhibitor 252 484 IPR032675 -
Lele31g0477 627 Gene3D Ribonuclease Inhibitor 8 93 IPR032675 -
Lele31g0477 627 Pfam Leucine Rich repeat 291 304 IPR001611 GO:0005515
Lele31g0477 627 FunFam Leucine-rich repeat receptor-like protein kinase TDR 163 482 - -
Lele31g0477 627 FunFam Nuclear pore complex protein NUP107 10 153 - -
Lele31g0477 627 Gene3D Ribonuclease Inhibitor 94 154 IPR032675 -
Lele31g0477 627 Gene3D Ribonuclease Inhibitor 162 251 IPR032675 -
Lele31g0477 627 Pfam Protein tyrosine and serine/threonine kinase 528 620 IPR001245 GO:0004672|GO:0006468
Lele31g0477 627 Gene3D Transferase(Phosphotransferase) domain 1 515 624 - -
Lele31g0477 627 SMART LRR_sd22_2 107 133 - -
Lele31g0477 627 SMART LRR_sd22_2 288 314 - -
Lele31g0477 627 SMART LRR_sd22_2 336 362 - -
Lele31g0477 627 SUPERFAMILY RNI-like 172 448 - -
Lele31g0477 627 Pfam Leucine Rich Repeat 411 430 IPR001611 GO:0005515
Lele31g0477 627 SMART LRR_typ_2 336 360 IPR003591 -
Lele31g0477 627 SMART LRR_typ_2 83 105 IPR003591 -
Lele31g0477 627 SMART LRR_typ_2 409 433 IPR003591 -
Lele31g0477 627 SMART LRR_typ_2 288 312 IPR003591 -
Lele31g0477 627 SMART LRR_typ_2 107 130 IPR003591 -
Lele31g0477 627 SMART LRR_typ_2 131 155 IPR003591 -
Lele31g0477 627 Pfam Leucine rich repeat N-terminal domain 12 55 IPR013210 -
Lele31g0477 627 PRINTS Leucine-rich repeat signature 336 349 - -
Lele31g0477 627 PRINTS Leucine-rich repeat signature 291 304 - -
Lele31g0477 627 SUPERFAMILY Protein kinase-like (PK-like) 528 624 IPR011009 -
Lele31g0477 627 SUPERFAMILY L domain-like 64 148 - -
Lele31g0477 627 Pfam Leucine rich repeat 314 373 IPR001611 GO:0005515
Lele31g0477 627 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 528 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0477 Lele-ChrLele31 12744440 12747440 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0477 89 544 Receptor kinase-like Gene Family AT4G08850 37.214 2.47e-82 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele31g0477 PK_Tyr_Ser-Thr 1.9e-06 CL0016