Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0473 ATGTTTCTATGTCATTTCACTTCAGGAATTACTGAATCTGAAGCTCTGATCAAATGGAAGCAAAGTCTCCCACACCAACCAATATTGGATTCATGGGTCCTTCCACCTTACAACAACAACAACTCTAAAGCAGTTCAAAGCCCATGCTCATGGCGTGGAATAACTTGTGATAATTCTACAGGAAGTGTGATCGAAATAAACTTGGCTGAAACTGGTCTTCAAGGTACCCTTCAAAACTTGAACTTGTTTTCATTTCCAAATCTTCTTCATCTTGATCTCAACACAAACAACCTCACTGGTAGCATACCAGAAAACATTGGGGTCCTCTCTAAACTACAATTCCTTGACCTTTCTACTAATCTCCTCAACGGCACTTTACCTCTTTCTCTTGCAAATTTGACTCAAGTTTATGAACTTGATGTTTCCAGAAACCCCATAACTGGGACCTTAGACCCACGTCTTTTTCCAGATGGTTCTGATCAACCCAAGATTGGATTGATTGGGATTAGAAATCTTCTCTTTCAAGACACCAATCTTGGTGGTAGAATTCCAGATGAAATAGGGAACATAAGCAATTTAACTGCGTTAGCTCTAGATGGGAATAGTTTCTATGGCCCTATTCCTCCATCTCTTGGAAACTGTTCACATTTAGGTGTTCTTAGGATGTCTGAAAACCAACTCTCAGGCATGATTCCCCCAAGTATTGGTAGATTGAGTAATCTATCTGATGTGCGCTTCCTCATGAATAATTTCTACAATAGGATACAAGAGCTTGATCTATCTTCCAATCAAATATCTGGAGAGATTCCTCCCCAAACAGGGAATTTATCCAGAATTTCTGTTCTATCTTTGAGTAGCAACAATCTGTCAGGATACATACCAACTAGCATTGGGAAGTTGTCAAATTTGCAAACTTTAGACTTGTCATCAAACATGCTAAGAGGACAAGTCCCTTCTCATGTAGGGGATTGCTCAAACTTAATGCGTTTAAATTTGAGCAATAACCACTTCATTGGAAAAGTCCCGTATCAAATTGGAAATCTTAAATACTTACAAGATTTTTTGGACTTGAGCTATAATTCATTATGCGGAGAAATCCCTGTGGATCTCAGTAAACTCAATAGCTTGATAAGCTTGAATGTTTCTCACAATAATTTGTCAGGTCCTATCCCTAATTCCCTAATAACAATGCAAAGCTTGTCAGTCCTCAATCTCTCTTACAATAACCTAGAGGGGCCTATAAAGGAAAGTGGAATTTTCAATTCTTCTAATCAAGTGGATTTGAGTCACAACAAAAACTTATGTGGGAGGATCCAAGGTTTGAAACCTTGCAATGTTTCAATTTTAAAACCACTTGGAGAAGGGGAAGGTGCATTTGGAAAAGTCTACAAACTGATAATGCTAGGGCAGGATAAAGTATTTGCTATAAAAAAGTTGGTATGTGAAGAACATAGCTTTGTCTTTGAGAGTATAAAAGCTTTTGAAAGTGAGCTCAAAGCCTTGAAAGAAACTCGCCACCGGAACATTGTGAAGTTGTACGGATTCTGCTCACAAAGATTGCACACATTTCTGATATATGAGTACATGGAAAGAGGGAGCTTAGCCGATATGCTTGGAAATAATACAAAAGCATTACAGTTGGAGCTTGCATATACAATGGAAGTGACTGAGAAAGTAGACGTGTATAGCTTTGGTGTTTTGGCTATTGAGGTGCTTATGGGAGAGCATCCTGGTGATTTAATATCACGAATTCAAATTTATGGGATTTCTCATATCAGCTATGAAGATATTTTGGACCCTCGCTTATCATCAACAAAGCATCACAACTTGAAGAACTTGTCTTTGATTTGGTATCTTGCACTTTCATGCTTACAAATCAACCCTCAATCTCGACCAACCATGAGAAGCATCGCCAACATGATTGAAATAGAGACTATTCCTTGA 1944 0.3832 MFLCHFTSGITESEALIKWKQSLPHQPILDSWVLPPYNNNNSKAVQSPCSWRGITCDNSTGSVIEINLAETGLQGTLQNLNLFSFPNLLHLDLNTNNLTGSIPENIGVLSKLQFLDLSTNLLNGTLPLSLANLTQVYELDVSRNPITGTLDPRLFPDGSDQPKIGLIGIRNLLFQDTNLGGRIPDEIGNISNLTALALDGNSFYGPIPPSLGNCSHLGVLRMSENQLSGMIPPSIGRLSNLSDVRFLMNNFYNRIQELDLSSNQISGEIPPQTGNLSRISVLSLSSNNLSGYIPTSIGKLSNLQTLDLSSNMLRGQVPSHVGDCSNLMRLNLSNNHFIGKVPYQIGNLKYLQDFLDLSYNSLCGEIPVDLSKLNSLISLNVSHNNLSGPIPNSLITMQSLSVLNLSYNNLEGPIKESGIFNSSNQVDLSHNKNLCGRIQGLKPCNVSILKPLGEGEGAFGKVYKLIMLGQDKVFAIKKLVCEEHSFVFESIKAFESELKALKETRHRNIVKLYGFCSQRLHTFLIYEYMERGSLADMLGNNTKALQLELAYTMEVTEKVDVYSFGVLAIEVLMGEHPGDLISRIQIYGISHISYEDILDPRLSSTKHHNLKNLSLIWYLALSCLQINPQSRPTMRSIANMIEIETIP 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0473 647 Gene3D Ribonuclease Inhibitor 255 448 IPR032675 -
Lele31g0473 647 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 455 636 - -
Lele31g0473 647 SUPERFAMILY RNI-like 65 424 - -
Lele31g0473 647 SUPERFAMILY Protein kinase-like (PK-like) 455 643 IPR011009 -
Lele31g0473 647 Pfam Leucine rich repeat N-terminal domain 12 57 IPR013210 -
Lele31g0473 647 Pfam Leucine Rich Repeat 375 394 IPR001611 GO:0005515
Lele31g0473 647 Pfam Leucine rich repeat 254 313 IPR001611 GO:0005515
Lele31g0473 647 Gene3D Ribonuclease Inhibitor 10 157 IPR032675 -
Lele31g0473 647 Pfam Protein kinase domain 455 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0473 647 ProSiteProfiles Protein kinase domain profile. 448 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0473 647 Gene3D Ribonuclease Inhibitor 164 254 IPR032675 -
Lele31g0473 647 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 254 447 - -
Lele31g0473 647 FunFam Nuclear pore complex protein NUP107 9 155 - -
Lele31g0473 647 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 164 253 - -
Lele31g0473 647 SMART LRR_typ_2 85 109 IPR003591 -
Lele31g0473 647 SMART LRR_typ_2 397 422 IPR003591 -
Lele31g0473 647 SMART LRR_typ_2 300 324 IPR003591 -
Lele31g0473 647 SMART LRR_typ_2 133 157 IPR003591 -
Lele31g0473 647 Pfam Protein tyrosine and serine/threonine kinase 547 640 IPR001245 GO:0004672|GO:0006468
Lele31g0473 647 PRINTS Leucine-rich repeat signature 300 313 - -
Lele31g0473 647 PRINTS Leucine-rich repeat signature 112 125 - -
Lele31g0473 647 Gene3D Phosphorylase Kinase; domain 1 455 526 - -
Lele31g0473 647 Gene3D Transferase(Phosphotransferase) domain 1 527 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0473 Lele-ChrLele31 12671417 12674620 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0473 88 559 Receptor kinase-like Gene Family AT4G08850 29.928 1.60e-54 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele31g0473 PK_Tyr_Ser-Thr 7.2e-06 CL0016