Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0472 ATGATGGCTCATAAGAAAATTTCTCTCTTCCTTGCAATAATTCATATTGCTTGCTTGGTTTGGTCACTGTGCCATTGCCATCTCACTTCAGGGCTTACAGAAACTGAAGCTCTTCTCAGATGGAAGCAAAGTCTTCCATATCAACCAATTCTGGATTCATGGTTCTCTCAGCCTCAAGCCAATTCCACTGCAGCCCAAACCCCATGTTCATGGCGTGGAATAAAGTGTGATTCTTCAGGAACTGTGATTGAACTCGACTTGAATAACACTGGTCTCAAAGGTACCCTCAAAAACTTGAATTTCTCATCATTCCCAAATCTTGTTCTTCTTAATCTCAAGTTCAATCAGCTCACTGGCCCCATACCAGAAACTATTGGCTTGCTCACAAAACTAGAATTCCTTGACCTTAATCGTAATCATTTCAATGGCTCTATACCTCTTTCTCTTGCTAATCTTACTCAACTTTATGAACTTGACCTTTCACAGAATCATATAACTGGGATATTAGACCCTCGTCTATTCCCTGATGGATCTGATGAACCCAAAACAGGCTTGATTGGTATCAAATATCTTGTTCTTCAACGCTTGCTCCTTGGAGGCAAAATTCCAAATCAAATAGGGAACTTGAAACAGTTGACTATTCTAGCTCTATATCAAAACAGCTTTTACGGACCTATACCTCAGTCTCTAGGGAATTGTACAAATTTAAACATTCTCTCATTGGCTGCAAATAGTCTCTCAGGCACAATTCCACATATTCTTGGTACATTACCAAATCTAACTGATGTTCGCTTGTTTATCAACAATTTATCTGGTCCTTTACCACAAGGATTTGAGAATCGTTCTTTTACTATGCTCAATCTCTCCAATAACAATTTCACTGGCCATTTACCACCACAAGTATGCAAAAATGGTGACTTACTTGAGTTCACTGCAGCTTACAATAGTTTCACTGGTCCAATACCAATGAGCCTCAGAAACTGCACATCTTTGGTTAGAGTTCGTCTTGAACATAACCAATTGACAGGATTTGTAGATGAAGATTTGGGAGTTTATCCTAATCTTACCTACATTGACCTCAGCTATAATAGGCTTCAAGGTAAGGTTTCTGCAAATTGGGCTGCCTGCAAGAGCTTGCAAGCTCTTATCATGGCTGGAAATTCAATAGGGGGAATTTTACCTAGTGAGATCTTTCAGTTGAAGAAACTAAAAAAGATTGACTTGAATTCAAACTTTATATCTGGTGAGATTCCTCCTCAAATTGGAATTGCCTCTAGCTTGTATCATCTTCACCTGGGAAGGAACAATCTTTCAGGTCCTTTACCTAATTACTTAGCAAAAATGTTAAGCTTGTCAAGCATCAATCTCTCCCATAACAATTTAGAAGGTCCTGTACCGGATAGTGGAATTTTTAATTCTTCTAATCCAGTGGATCTAAATTTTGGCACAGCAAGGTTCTTGAAGACCGATTCATCAATTTGGACAACATTTGCTGGCACATATGGCTATGCTGCTCCAGAGCTTGCATACACAATGGAAGTGACCGAGAAAGTAGATGTGTATAGCTTTGGTGTTTTGGCTATTGAGGTGCTTATGGGAGAGCATCCTGGTGATTTAATATCACGTATTCAAATGTATGGGATTAATCAGATCAGCTTCCAAGATATTCTGGACCCTCGCTTATCATCAACAAGTGAGCAAAACTTGAAGAAATTGGCTTTGATTTGGCAAATAGCTCTTTCATGCTTACAAACCAAGCCTCAATCTCGACCAACCATGGAAAGCATCGCCAACATGATTGAAATAGAGACTATTCATTAG 1821 0.3915 MMAHKKISLFLAIIHIACLVWSLCHCHLTSGLTETEALLRWKQSLPYQPILDSWFSQPQANSTAAQTPCSWRGIKCDSSGTVIELDLNNTGLKGTLKNLNFSSFPNLVLLNLKFNQLTGPIPETIGLLTKLEFLDLNRNHFNGSIPLSLANLTQLYELDLSQNHITGILDPRLFPDGSDEPKTGLIGIKYLVLQRLLLGGKIPNQIGNLKQLTILALYQNSFYGPIPQSLGNCTNLNILSLAANSLSGTIPHILGTLPNLTDVRLFINNLSGPLPQGFENRSFTMLNLSNNNFTGHLPPQVCKNGDLLEFTAAYNSFTGPIPMSLRNCTSLVRVRLEHNQLTGFVDEDLGVYPNLTYIDLSYNRLQGKVSANWAACKSLQALIMAGNSIGGILPSEIFQLKKLKKIDLNSNFISGEIPPQIGIASSLYHLHLGRNNLSGPLPNYLAKMLSLSSINLSHNNLEGPVPDSGIFNSSNPVDLNFGTARFLKTDSSIWTTFAGTYGYAAPELAYTMEVTEKVDVYSFGVLAIEVLMGEHPGDLISRIQMYGINQISFQDILDPRLSSTSEQNLKKLALIWQIALSCLQTKPQSRPTMESIANMIEIETIH 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0472 606 Pfam Leucine rich repeat N-terminal domain 34 77 IPR013210 -
Lele31g0472 606 FunFam Nuclear pore complex protein NUP107 32 174 - -
Lele31g0472 606 Gene3D Ribonuclease Inhibitor 182 281 IPR032675 -
Lele31g0472 606 FunFam Leucine-rich repeat receptor protein kinase EMS1 394 489 - -
Lele31g0472 606 FunFam Piriformospora indica-insensitive protein 2 202 298 - -
Lele31g0472 606 Gene3D Ribonuclease Inhibitor 32 176 IPR032675 -
Lele31g0472 606 SMART serkin_6 357 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0472 606 Gene3D Ribonuclease Inhibitor 369 476 IPR032675 -
Lele31g0472 606 Gene3D Ribonuclease Inhibitor 282 368 IPR032675 -
Lele31g0472 606 ProSiteProfiles Protein kinase domain profile. 268 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0472 606 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 299 393 - -
Lele31g0472 606 Pfam Protein kinase domain 481 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0472 606 Gene3D Transferase(Phosphotransferase) domain 1 477 605 - -
Lele31g0472 606 SUPERFAMILY L domain-like 53 473 - -
Lele31g0472 606 PANTHER LEUCINE RICH REPEAT KINASE 2 282 468 - -
Lele31g0472 606 SUPERFAMILY Protein kinase-like (PK-like) 480 602 IPR011009 -
Lele31g0472 606 SMART LRR_typ_2 128 151 IPR003591 -
Lele31g0472 606 SMART LRR_typ_2 400 424 IPR003591 -
Lele31g0472 606 SMART LRR_typ_2 448 473 IPR003591 -
Lele31g0472 606 SMART LRR_typ_2 152 176 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0472 Lele-ChrLele31 12629364 12632618 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0472 110 476 Receptor kinase-like Gene Family AT4G08850 32.143 8.26e-53 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele31g0472 Pkinase 2.4e-13 CL0016