Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0468 ATGACTGATTCGTGGGTTCCTTCAGGGCAAGGCCCTCACTTTCACCACCCAACCGCTGGCATTATCGAGAGGGTTCGATTGGAGAACTTCATGTGCCATAGCAACCTCGAGATTGAGCTCGCAGAGTGGGTCAACTTCATTACTGGTCAAAATGGAAATTCTAATGCAAAACTTTTCATAAGCTTCTATCAAGCTCTACATCTTCCTCACTGTCTTTCCTCAAGAAAAAGTTGTCTTTCTTCATTAATAATGGCTGTAAAGGGTGGGAGTTTGCTATTGCCTCTTGCCAGTCATGCTGTCATCCATGTAGAAATAAAAAATGAAGGAGAGGATGCTTTTAAGCCACAAATATATGGTGATATGATTATTTTAGAACGTAGGATATCTGAATCCACAGGCTCCATAGTGTTAAAAGACTTCAAAGGGAACAAGTTTGTTAGAGGAAGAATAAGAGATGTGCTGGGGAATGTAGAATATCCTCCAAAACAGACAAGAAAGACCCCAGAGTTCTTTTACAAGGCTACACTTCTTCAGCAAGTTGATGATCTTTTGGAAAGCGTTTCTAGAGGATTAGAGCATCCATTTGGACTTCTTGGAGGATTAGAGGCTACAATAAGGCATGTAGAGAAGGAGCTTAATGAGTTAAGAGTCAAAATCACAAACATGGAACAAGTTGAACAAATATCACTGCAGATTCAGCAGTTAAAGAAAAAACTTACTTGGTCATGGCTTTATGATGTGGACAAACAAATCCAGGAACAACGTTCAAAGATTGATAAATTAAAGGATCGAATACCTAAGTGCAAGCCAAAATTGATGAGCAAATGTGCTGATGTACAGATTCCAAATGAAACATGTGACCTTATAAAAGGACTCTTTGTTCTGCAGCATCTGATTGAAGAATTGATGGCATGTTTAAATAAGAAGAAAGGTCATATTAAAAACTTGTTTGAAAAGACATCTGAAGTGAAGCAGAAGAAGCAAAATTTACAACAATGCTTGCCAGAGAGCCTTAGAATTACGAAGGAACAAGTTTCACAGAAATGCAACTTATTTGAAGCGTTTGTTGTCTTGGAAATGCAAATGCCTCAAGATGCATCAGGATGTGCTGTTCGTGACACTCGAGGCCTTTCAGGCTAA 1140 0.3904 MTDSWVPSGQGPHFHHPTAGIIERVRLENFMCHSNLEIELAEWVNFITGQNGNSNAKLFISFYQALHLPHCLSSRKSCLSSLIMAVKGGSLLLPLASHAVIHVEIKNEGEDAFKPQIYGDMIILERRISESTGSIVLKDFKGNKFVRGRIRDVLGNVEYPPKQTRKTPEFFYKATLLQQVDDLLESVSRGLEHPFGLLGGLEATIRHVEKELNELRVKITNMEQVEQISLQIQQLKKKLTWSWLYDVDKQIQEQRSKIDKLKDRIPKCKPKLMSKCADVQIPNETCDLIKGLFVLQHLIEELMACLNKKKGHIKNLFEKTSEVKQKKQNLQQCLPESLRITKEQVSQKCNLFEAFVVLEMQMPQDASGCAVRDTRGLSG 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0468 379 Coils Coil 198 225 - -
Lele31g0468 379 Gene3D - 198 280 - -
Lele31g0468 379 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 17 337 - -
Lele31g0468 379 Coils Coil 244 264 - -
Lele31g0468 379 Gene3D - 21 179 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0468 Lele-ChrLele31 12575813 12583087 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0468 18 350 Structural Maintenance of Chromosomes family AT5G07660 39.888 5.98e-72 241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g1068 29 8236706 8245879 Lele31g0468 31 12575813 12583087 hybridization