Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0459 ATGGAGTTTGGAATTTTAAGCTCTAAATTTTTTTATCTTTTCGTATTTGGAAGCTTCGCTTTGAACGCTTTCACAGACTACGGATCCAATGCTCAACGCATTCCAGATGATGAAGTGAAAGTTCTAAGAACAATATCATGGAAGATAGAGAATTTGAATTGGAACGTGAGCCCAAATTCTTGTATTGATGGAAGCTTCAAAAATACGACTATTAGGGAAAAGAACAGCATCATAAGGAATGTAACATGCAATTGCACTTTTTCAAGCGGAAAAGTTTGCCATGTTACACATATCCAAATGACAGGTCTCAATCTATCTGGACTTTTACCAAATGAATTTGGGTATCTTACTCATCTGCAAGAACTTGATTTGTCTCACAATTATTTAAACGGATTAATCCCAAGGAGCTTTGCTAGACTCCCTCTTGTTGCATTATACCTCGAGGGTAATCCAATTAGTGGTTCAATTCCAAAGGAAATTGGTGACATTACACCTTTGGAGGAGTTAGTATTGACAGATAATATGTTAGAAGGAACTCTTCCTTCTAGTCTTGGAAAATTGAAGCAGTTACGCATATTGTTTCTTTCTGGAAATAATTTCTCAGGTACAATACCCGAAAGTTTTTGCAATTTGAAGAAACTAGAAAAGATTGAATTAGATGGGAGCAATATAACGGGAAAAATACCCAATTTTATTGGGAATTGGACCGAACTGGAGCAACTACTTTTGCAGGGAACGTCTATGGAAGGCCCCATTCCCACTACCATATCTCTGTTAACAAATTTGGTAATATCAGATTTGCATGGACCAGTGACAATGAGATTTCCTAATCTGGAGAATTTGACATCCTTGCGATACCTGGCATTGAGAAATTGCTCCATCCATGATTCCATTCCAAATTACATTGGTAAAATGGGAAACTTGTCTGCTTTAGATTTGAGCTTCAACAAGTTGATTGGTGAAATCCCAAGCAACATAAGCTTGACTGACATGCGGTACCTGATTCTAACTGAAAATTCTTTGGGTGGAAAAGTTCCTGAATGGATCCTGCAAAACAGCAATGATTATTTTGATCTATCTTACAACAATTTTTCAGAGACTTCTGCGCCTACTCGTCAGTACAATAATATAAACTTGGCTTCAAGCTTGTCATCTTCAGCAAACACCTCACGTACTTGCCTGAAAAGGGGCCTTCCTTGTGGTAGAAAACCCAAATATCATTCATTATTCATAAATTGTGGAGGATTAAAATTTGAATATGAAAGGAATAAATACGAAGAAGACATCAATCCTGGGGGTATCTCATTTTTCTTTTCTAGTAATGATAAATGGGCTTATAGCAGCACAGGAGCATACTTACGAGGATATAATCATTACACAGCAACAAACGTATTTTCTCTCAACATTACTGGTCCTGACTTCTACCAAACAGCTCGCCTTTCCCCTTTGTCTCTCAAGTACTATGGCCTCTGTATGATTAATGGAAATTACAATGTCAAGCTACACTTTGCTGAGATTATGTTTCCTCATCATGACCAAAATTTCAGCAGTCTTGGTAGGCGCATATTTGATGTTTCAGTTCAAGGTAAGAAGTACTTGCGTGATTTCAACATTATGAAAGAAGCTGGGGGTGTTGGTAAGGGCATTGTCAGGGACTTTAATGTTAATGTCAATGATAACACCTTGGAGATTCATTTATACTGGGCTGGAAAAGGAACTAGATCTATTCCTGATGATGGTATTTATGGACCTCTTATATCTGCTATTTCAATCACCCCAAACTTCAAAATTCCTAGTATTTCTGCTGGAGCCATTGCTGGAATTGTGGTTGGATCATGTGTGTTCCTCATACTAATTGTATCTGTCCTTCGAAAGATGGATTTTCTACGTGGCAAAGGTTCAAAAGACAAACAACTGTTAGATCTAAAAACGGGTTATTTCTCTTTAAAACAAATCAAATATGCCACTAATAACTTTGCTCCAGAAAATAAGATCGGTGAAGGAGGTTTTGGACCAGTATACAAGGGTGTACTATCAGATCGTGTTGTCATAGCAGTGAAGCAGCTTTCCTCGAAATCAAAGCAAGGGAATCGTGAATTTGTTAATGAAATTGGAATCATATCTGCTTTGCAACACCCAAACCTGGTAAAGCTTTATGGTTGTTGCGTTGAAGGAAACCAATTGTTGCTAATATATGAGTTCATGGAGAACAACAGTCTTGCTAGTGCTCTTTTTGGTGGCCAAGGACAAAAGAGAGACTTGGATTGGCCTACCAGAACGAATATATGTGTTGGGATAGCAAGAGGATTAGCTTACCTTCATGAGGAATCACGGCTAAAAATTGTGCATAGGGATATTAAGGCAACAAATGTATTACTGGATAAAGATTTGAATGCCAAGATCTCAGACTTTGGCTTAGCCAAACTTGATGAAGATGAGAATACTCATATTAGCACGAGAATAGCAGGAACAATTGGTTATATGGCTCCTGAATATGCAATGCGAGGATACCTGACTGACAAAGCAGATGTTTATAGTTTTGGAGTTGTTGCTTTAGAAATTGTCAGTGGAAAAAGCAACACAAGTTACAGGCCAAAAGAGAAGTTTGCTTATCTTCTGGATTGGGTTAGTTATACTACTTATGCTTAG 2649 0.3771 MEFGILSSKFFYLFVFGSFALNAFTDYGSNAQRIPDDEVKVLRTISWKIENLNWNVSPNSCIDGSFKNTTIREKNSIIRNVTCNCTFSSGKVCHVTHIQMTGLNLSGLLPNEFGYLTHLQELDLSHNYLNGLIPRSFARLPLVALYLEGNPISGSIPKEIGDITPLEELVLTDNMLEGTLPSSLGKLKQLRILFLSGNNFSGTIPESFCNLKKLEKIELDGSNITGKIPNFIGNWTELEQLLLQGTSMEGPIPTTISLLTNLVISDLHGPVTMRFPNLENLTSLRYLALRNCSIHDSIPNYIGKMGNLSALDLSFNKLIGEIPSNISLTDMRYLILTENSLGGKVPEWILQNSNDYFDLSYNNFSETSAPTRQYNNINLASSLSSSANTSRTCLKRGLPCGRKPKYHSLFINCGGLKFEYERNKYEEDINPGGISFFFSSNDKWAYSSTGAYLRGYNHYTATNVFSLNITGPDFYQTARLSPLSLKYYGLCMINGNYNVKLHFAEIMFPHHDQNFSSLGRRIFDVSVQGKKYLRDFNIMKEAGGVGKGIVRDFNVNVNDNTLEIHLYWAGKGTRSIPDDGIYGPLISAISITPNFKIPSISAGAIAGIVVGSCVFLILIVSVLRKMDFLRGKGSKDKQLLDLKTGYFSLKQIKYATNNFAPENKIGEGGFGPVYKGVLSDRVVIAVKQLSSKSKQGNREFVNEIGIISALQHPNLVKLYGCCVEGNQLLLIYEFMENNSLASALFGGQGQKRDLDWPTRTNICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLDEDENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTSYRPKEKFAYLLDWVSYTTYA 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0459 882 ProSitePatterns Serine/Threonine protein kinases active-site signature. 781 793 IPR008271 GO:0004672|GO:0006468
Lele31g0459 882 Gene3D Phosphorylase Kinase; domain 1 624 734 - -
Lele31g0459 882 Gene3D Transferase(Phosphotransferase) domain 1 735 881 - -
Lele31g0459 882 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g29720 735 880 - -
Lele31g0459 882 Gene3D Ribonuclease Inhibitor 198 395 IPR032675 -
Lele31g0459 882 Pfam Protein tyrosine and serine/threonine kinase 662 867 IPR001245 GO:0004672|GO:0006468
Lele31g0459 882 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 38 203 - -
Lele31g0459 882 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 406 594 - -
Lele31g0459 882 CDD STKc_IRAK 665 876 - -
Lele31g0459 882 Gene3D Ribonuclease Inhibitor 50 197 IPR032675 -
Lele31g0459 882 SUPERFAMILY Protein kinase-like (PK-like) 643 868 IPR011009 -
Lele31g0459 882 Pfam Leucine rich repeat 166 224 IPR001611 GO:0005515
Lele31g0459 882 Pfam Leucine rich repeat 102 152 IPR001611 GO:0005515
Lele31g0459 882 ProSiteProfiles Protein kinase domain profile. 659 882 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0459 882 SUPERFAMILY L domain-like 74 379 - -
Lele31g0459 882 SMART serkin_6 659 876 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0459 882 SMART LRR_typ_2 187 211 IPR003591 -
Lele31g0459 882 SMART LRR_typ_2 305 329 IPR003591 -
Lele31g0459 882 SMART LRR_typ_2 116 139 IPR003591 -
Lele31g0459 882 PRINTS Leucine-rich repeat signature 119 132 - -
Lele31g0459 882 PRINTS Leucine-rich repeat signature 305 318 - -
Lele31g0459 882 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 630 734 - -
Lele31g0459 882 ProSiteProfiles Leucine-rich repeat profile. 307 329 IPR001611 GO:0005515
Lele31g0459 882 Pfam Malectin domain 409 589 IPR021720 -
Lele31g0459 882 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 41 877 - -
Lele31g0459 882 Gene3D - 407 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0459 Lele-ChrLele31 12463854 12474509 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0459 27 876 Receptor kinase-like Gene Family AT1G53440 57.949 0.0 966
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele31g0459 PK_Tyr_Ser-Thr 2.1e-48 CL0016