Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0454 ATGGCATCAATAGTTCTTAAACTTTTCTTTTCCCTCACTTTCTTTTCTTCACTTTTCTCAATATCTTCTTCTTCTTCTATAGATTTTTGGTGTGACCAAACTCCTCACCCTGAGCCATGCAAATACCACATTAGCCAGAACAGTCACCACCGGTTCAGACTGAACCATCCGTCAGAGTTCAGGAAAACGCTGGTTCAGTTAGCACTGGACCAAGCCGGCGCCATGCATAAGGAAGCTCATGAAAATGGCCCAAAATGTGAGACCAAGATGCAAAAATGTGTGTTGAGTGATTGTTTAAAGCTCTATGATAACACCATCTTCCATCTCAACCGAACCCTTCAAGCCCTACACACTGCTTCTTGCTCTCTTTCAGACGCACAAACATGGCTCAGCACTGCCCTCACTAACATCCAAACTTGCCGGAGCGTCGTCTTGCAGCACGGAATTGTCTCTCTGAATAATGCAAGCGACAACGTTAGGAAGATGTTAAGCAACGTGTTAGCTGTGAATGGGAAATCTCTGAAGCGAGAGAATTACACAGAAGATGAAGAGATCAAAGCACATGGTTTTCCGAGCTGGTTTTCTCGGCCTGACCGGAGGCTCTTGAGCTTGAAGCGATCGTCGGTGAAGGCACATCTGGTGGTAGCTCAAGACGGCACGGGCCATTTCAAGACGGTGCAAGCCGCCATTGATGTAGCTTCAAGGAGAAGAGTGAAGGCGAGGTTTGTGATAAGAGTGAAGAAAGGGATATATGAAGAGAATATTGAAGTTGATAAGAATAATGAGAATCTCATGATTGTTGGAGATGGAACCAGAGCCACCATGATAAGTGGTAGTAGAAGCGTTAAAGACGGAATTACCCCCGCTAGCTCCGCAACAGCAGGTATAGATGGTGCTCACTTCATTGCACGAGACATCACTTTCAGAAACACGGCGGGTCCCGAAAAAGGCCAAGCGGTGGCACTACGATCAGCCTCCGACCTCTCCGTCTTCTACCGGTGCTCCATCGAAGGCTACCAAGACACTCTAATGGCTCATGCACAACGCCAATTCTATAGAGACTGCAGAATCTTCGGAACAGTGGATTTCATATGGGGCAATGCCGCAGTTGTTCTACAAAACTGCAGAATTCTGGTAAGAAAGCCACTTGAAGGGCAAGCCAACATGATCACAGCTCAAGGACGAGGCGACCCCTTTCAGAACACCGGAATATCGATCATCAACTCTCAGATTCGAGCGGCGCAGGATTTCAGGCGGGTTTCAAAGTCATTTGAAACGTATTTGGGTCGGCCATGGCAGCAATATGCAAGAGTAGTTGTCATGAAGACTTTCATAGAAGGATTGGTGAATCCAAAGGGGTGGTCTCCATGGGGTGAAAGTGATAGTTATGCACAAGGTACGTGCTATTTTGGGGAATATATGAACTTTGGGGCGGGTTCGGCAACAAAAAGTAGGGTACAATGGAGAGGGTTTCATGTTATAAGGAATCCAAATGAGGCAAACCAGTTCAGTGTTGCTGCTTTCCTTGCTGGTCGCACATGGTTGCCTCGCACTGGGATCCCTTTTAGTAATGGGGTTTAA 1581 0.4681 MASIVLKLFFSLTFFSSLFSISSSSSIDFWCDQTPHPEPCKYHISQNSHHRFRLNHPSEFRKTLVQLALDQAGAMHKEAHENGPKCETKMQKCVLSDCLKLYDNTIFHLNRTLQALHTASCSLSDAQTWLSTALTNIQTCRSVVLQHGIVSLNNASDNVRKMLSNVLAVNGKSLKRENYTEDEEIKAHGFPSWFSRPDRRLLSLKRSSVKAHLVVAQDGTGHFKTVQAAIDVASRRRVKARFVIRVKKGIYEENIEVDKNNENLMIVGDGTRATMISGSRSVKDGITPASSATAGIDGAHFIARDITFRNTAGPEKGQAVALRSASDLSVFYRCSIEGYQDTLMAHAQRQFYRDCRIFGTVDFIWGNAAVVLQNCRILVRKPLEGQANMITAQGRGDPFQNTGISIINSQIRAAQDFRRVSKSFETYLGRPWQQYARVVVMKTFIEGLVNPKGWSPWGESDSYAQGTCYFGEYMNFGAGSATKSRVQWRGFHVIRNPNEANQFSVAAFLAGRTWLPRTGIPFSNGV 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0454 526 FunFam Pectinesterase 206 526 - -
Lele31g0454 526 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 25 171 IPR035513 -
Lele31g0454 526 Gene3D - 206 526 IPR012334 -
Lele31g0454 526 Pfam Plant invertase/pectin methylesterase inhibitor 26 168 IPR006501 GO:0004857
Lele31g0454 526 Gene3D Invertase/pectin methylesterase inhibitor family protein 21 172 IPR035513 -
Lele31g0454 526 SUPERFAMILY Pectin lyase-like 209 525 IPR011050 -
Lele31g0454 526 CDD PMEI-like_3 30 172 - -
Lele31g0454 526 PANTHER PECTINESTERASE 13 516 - -
Lele31g0454 526 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 171 IPR006501 GO:0004857
Lele31g0454 526 Pfam Pectinesterase 213 511 IPR000070 GO:0030599|GO:0042545
Lele31g0454 526 SMART PMEI_2 22 169 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0454 Lele-ChrLele31 12440634 12442752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0454 23 524 Carbohydrate Esterase AT5G51500 54.971 0.0 564