Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0449 ATGAAGGCCCTTTCTTCTTCTTCTACTAACCATCTCTTTATCCCCATTTTCATAATCGTTTCTTCAATAATCTCAATTGCATCTTCTGAAAAACCCTACCAAGATGCCAACACACAGTTCATAAGAACATCTTGTACTTCCACAACTTACCCAAGGCTCTGCTTCGCCTCCTTATCAAAGCACGCCGGCTTCATACAAACCAACCGCGTGCTCCTCACCGGCACCGCCCTAAACGTGACCCTGGCGTCAGCTAAGGCCACGTCGGCGATGATGTCAACGCTGTCCAAGAGCTTCGGGATGAAGCCAAGGGAGGTGGCGGCGATGAGGGACTGCGTGGAGGAGCTGAGGAACTCGGTGGACGAACTCAGGAAGTCGATTGGCGAGATGAGTCAACTCGGAGACTCGAACTTTGAGCTCACCATGAATGATGTTCAAACTTGGGTTTCAGCTGCTTTGACTGATGAGAGCACTTGCAGTGATGGGTTTGAAGGAGTTAATAATGGAAATTTGAAGAACAATGTGAGAAGCAGAATCGTGCAAGTGGCTCAGCTTACTAGTAATGCTTTGGCTTTCATAAATCAGCTTGCTTCTTCACATGCTTAA 603 0.476 MKALSSSSTNHLFIPIFIIVSSIISIASSEKPYQDANTQFIRTSCTSTTYPRLCFASLSKHAGFIQTNRVLLTGTALNVTLASAKATSAMMSTLSKSFGMKPREVAAMRDCVEELRNSVDELRKSIGEMSQLGDSNFELTMNDVQTWVSAALTDESTCSDGFEGVNNGNLKNNVRSRIVQVAQLTSNALAFINQLASSHA 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0449 200 CDD PMEI-like_3 43 197 - -
Lele31g0449 200 FunFam Pectin methylesterase inhibitor 1 36 195 - -
Lele31g0449 200 Coils Coil 105 132 - -
Lele31g0449 200 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 195 IPR035513 -
Lele31g0449 200 PANTHER PECTINESTERASE INHIBITOR-LIKE 16 191 - -
Lele31g0449 200 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 197 IPR035513 -
Lele31g0449 200 SMART PMEI_2 36 191 IPR006501 GO:0004857
Lele31g0449 200 TIGRFAM PME_inhib: pectinesterase inhibitor domain 12 195 IPR006501 GO:0004857
Lele31g0449 200 Pfam Plant invertase/pectin methylesterase inhibitor 40 190 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0449 Lele-ChrLele31 12365493 12366095 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0449 41 195 Carbohydrate Esterase AT1G53830 31.056 3.68e-19 82.8