Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0437 ATGGATGAGAAAGTCAGAAAAAAAAGATCCAAGTCTAGCAGGAGCAAGGACTTTATGGATGTGCCATCAAATGATGAAAAGGATCTGGGACATGGTCTTGAGGTGGAGCCAGATATAGAAAAGAAACGGAAGCATAAGGATAAAAAGAAAAAATGTAGAACCGATGAAGTTTTCAATTTGAACAAAGTTGTTGAGGAAAATTGTACAGGTATAGCAGCCAACGGACAAGATTGTCCCAGTGAAGGGGATGTCACATTTATGAGAAATGGAGAAGAGAACAATAAAAGTAAGAGAAAGAAAAGGAAGAAGGGAAAAGATAAGGATGAAATAATCAATGGTATCATTGTTGGTGATAATGAAATGCAGTTTGATGACAAGCAAGAAAGGAAAACAAAGAAAAGAAAACATTGCAATGATACAATCCCTGAAATGCAAGAAAACAATGGAAAAGAGGTTATCGGGCTTAAAAGCAATAAAGGTGGATCATCTTTAGCCAGTGTTAAGATGATAGATGCTAATACTCATTCTGTTGTCACTAACAGTGATGGTCAAGGGAAGAAGATTAAGAAGAAGGATAAACTAACTAAAAAAAGCAAAAGAATAGAAGATAATGAATTCAAAAGCAACGTTGGTGATCAAGCTTCAGCTAAAGGTGAAGAAGGTGATCCCCATTTGTCAAAAATCAATATGGGGGATGCTGCTGAACATGCTAGTTCTACCAAAGGTGATGATCAAGGCTTGAATCAGAAATGGAAAAGCACTAAGAAGAAGAAGAGGAAGGAAGGTAAACGAGTAAAATTTTCTGATCAAGTGGAGGTTTTTGATGATGGCTTAGTGCAAGGGAAAAGGTTTACACCCGAGGAAGATGAGAAGATTAAAGAGGCTATTTACGGCTATATACATTCTCATGGGCTGGGTGATATTGATCAAGGCGTGGATATGATTCTCCATTGCTCATCTTATCCTAAGATTAAAGGTTGTTGGAAGGAAATTGCATCGGCTTTACCTCACCGGCCTCAGGAAAGTGTATATCATCGTGGTCATATTTTGTTCGAAAGGGGTGATAGTCGTAAATGGACCCCTGAAGAGTTAGAAATTGTACGAAATTTCCATGAAAAACATGGATCTAACTGGAAAATGTTGGCCGATGCAATGGGGAAACATCGGTTTCATGTAAAGGATCAATGGCGTAGGATAAAATTAGAAAATATGAACAAAGGACATTGGTCACAAGAGGAGTATCAAAAATTATTTGATTTAGTAAATGCTGATCTGGGTCTGAGGGCTTTAGAGGAGAACAGAAAATATAAACATGGTATGTTGCGGGATAATATATGTTGGGAGGCAATTGGTGATAAGGTGGCAACTAGAAACAGTCAAACTTGCTGTAGTAAGTGGTATGAAAAATTAACTTCTCCTATGGTTGCCGAAGGTGAATGGGCCGATACTGATGACTACCGCCTGATTGATGCTTTATATACATTGGATGCCTGTAGCATGGAGGAGGTGGAGTGGGATCATTTGCTTGAGCATAGGTCTGGTGATGTATGTAGAAAACGATGGAATCAAATGGTCCGGCATGTTGGAGAGCATGGGAACAAGTCATTTTCTGAGCTAGTGGAAATTCTTTCAAAGAGATATCGTCCTGACTTAGTGGAAGCGAGAGAAGCCTTTGATAGCCTGCCTTTGGTCCCTTGA 1698 0.3899 MDEKVRKKRSKSSRSKDFMDVPSNDEKDLGHGLEVEPDIEKKRKHKDKKKKCRTDEVFNLNKVVEENCTGIAANGQDCPSEGDVTFMRNGEENNKSKRKKRKKGKDKDEIINGIIVGDNEMQFDDKQERKTKKRKHCNDTIPEMQENNGKEVIGLKSNKGGSSLASVKMIDANTHSVVTNSDGQGKKIKKKDKLTKKSKRIEDNEFKSNVGDQASAKGEEGDPHLSKINMGDAAEHASSTKGDDQGLNQKWKSTKKKKRKEGKRVKFSDQVEVFDDGLVQGKRFTPEEDEKIKEAIYGYIHSHGLGDIDQGVDMILHCSSYPKIKGCWKEIASALPHRPQESVYHRGHILFERGDSRKWTPEELEIVRNFHEKHGSNWKMLADAMGKHRFHVKDQWRRIKLENMNKGHWSQEEYQKLFDLVNADLGLRALEENRKYKHGMLRDNICWEAIGDKVATRNSQTCCSKWYEKLTSPMVAEGEWADTDDYRLIDALYTLDACSMEEVEWDHLLEHRSGDVCRKRWNQMVRHVGEHGNKSFSELVEILSKRYRPDLVEAREAFDSLPLVP 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0437 565 MobiDBLite consensus disorder prediction 125 149 - -
Lele31g0437 565 MobiDBLite consensus disorder prediction 72 108 - -
Lele31g0437 565 Gene3D - 399 474 - -
Lele31g0437 565 Gene3D - 360 398 - -
Lele31g0437 565 SUPERFAMILY Homeodomain-like 450 533 IPR009057 -
Lele31g0437 565 ProSiteProfiles Myb-like domain profile. 472 525 IPR001005 -
Lele31g0437 565 PANTHER GB|AAC33480.1 9 564 - -
Lele31g0437 565 CDD SANT 283 346 IPR001005 -
Lele31g0437 565 ProSiteProfiles Myb-like domain profile. 358 400 IPR001005 -
Lele31g0437 565 Pfam Myb-like DNA-binding domain 359 417 - -
Lele31g0437 565 SMART sant 405 472 IPR001005 -
Lele31g0437 565 SMART sant 355 402 IPR001005 -
Lele31g0437 565 SMART sant 476 527 IPR001005 -
Lele31g0437 565 SMART sant 280 353 IPR001005 -
Lele31g0437 565 CDD SANT 409 470 IPR001005 -
Lele31g0437 565 MobiDBLite consensus disorder prediction 1 53 - -
Lele31g0437 565 MobiDBLite consensus disorder prediction 125 141 - -
Lele31g0437 565 MobiDBLite consensus disorder prediction 1 43 - -
Lele31g0437 565 ProSiteProfiles Myb-like domain profile. 401 470 IPR001005 -
Lele31g0437 565 MobiDBLite consensus disorder prediction 174 264 - -
Lele31g0437 565 CDD SANT 358 400 IPR001005 -
Lele31g0437 565 SUPERFAMILY Homeodomain-like 357 417 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0437 Lele-ChrLele31 12227491 12229188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0437 353 526 MYB Transcription Factor Family AT4G32730 26.257 8.83e-07 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele31g0437 Myb_DNA-bind_6 3.2e-11 CL0123