LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele31g0405	ATGCACCACACGTGGATGTCAATGGAGGAACGTAACAATATATGTTTACTCACAAGCATAGCCATCTATTCTTCTATTCACTGGAACAAGACGAAGCTAGAGATGGCGATGGCGAAACAGCTTCTCCATTTTCATCACTTCTTCTTCGTCTTGCTCTTCTTTCTTGCTATCCACCGTACACATCAGTTACAACATTCTCAGTCTTATGCCCTTCTGAAATTCCAGAAGCTTCTGGGGTACCCATCAGCTCTAAGCAGCTTGAGAACCACAAGAGATTTCTGCAACATTGAGCCCACCAGCTATTTGACTATAGTCTGCTATGAGGACGACGTAACGCAGCTTCATGTTGTTGGTGATAATGGGGTTTCTCCTTTGCCTCAAGATTTCTCTTCTGACTCTCTATTTGCCACTTTGGGTACTCTTTCGAGCTTGAAAGTTCTTTCTCTTGTTTCAGTGGGTCTCTGGGGTCCCATACCTGCAAGCATTTATCAACTGTCTTCTCTGGAGATTCTCAACATTAGCTCAAATCATTTCAGTGGAGCCATACCAACCCAACTTTCTCTGTTGAAGAATCTGCAATCATTGGTTCTTGATGATAACGATTTCCCTGGTAAAATTCCCATCTGGGTAGGTTCGCTCCAAGGTTTAGCTGTGTTGAGTATGAGAAGAAATTTTCTTAATGGGTCTGTGCCAGCTTCGGTTAGAGATCTTCAAACTCTGAGGGTGCTGGATCTATCAAATAATCATTTACATGGTGAACTACCTGGCCTTAGTAATCTGAAAAATCTACAAGTTCTTAATCTTGAAAACAACACATTGGGACCCCGTTTTCCTTCTCTACCCACCAAGCTAGTTTCATTAGTGCTGAGAAATAACAGCTTCCGGTTTGGTATACCTTCTAATTTAAGCTCCTACTACCAGCTTCAAATGCTAGACCTTTCATTAAATGGATTTGTGGGACCATTTCTACCGTCTTTACTTTCTTTGCCTTCCATCAAATACCTTGATGTTTCAGCAAATAAATTTTCTGGGATGCTGTTCAGTAATTATACTTGCAACTCTGATATTCTTTTTGTGAATCTATCTTCAAATCTCTTGAAAGGGGAACTTCCCATTTGTTTGGAACCAGATAACAAAGTGGTTGCTTTGTATGCTAGAAATTGTTTTTCAAATGAGGATCAAGATCAGCACCCTTCCACCTTCTGTCAACCTGAGGCTCTAGCAGTGAATGTTTTGCCACATGAACAGAAGCAGAGAAAAAGAACAACTGGTAAAGCGGTTATTGTGTCAAGTATGGGAGGAATTGTTGGAGGAGCCCTTGTTTTTGGAGTGGTTTTTCTGGTTATTGTACGAGTAAACAAAAAAGGCTCTGTCAAAGCACCTGAAGGGTCAACATTAGAGCAAGTTATAAGCCAGATGGATGATAAAGGTGATGAAGTTAAAACAACTAGAACTGTACTGTCTGTAATGGAGAATATCATCAGCCGAGTCCCTAAGCCCAACAAGGAATCTGTGAAAACATTTGCAAGATCCATGATGGGGCATGTTGTTAACAGGGTTCATCATAGACATGTGAGACCTGCAAGGTCCATAGTAGAGCATGTCTCATCAATGAACACAGCAAAACTGCTCACAGATGCAAGGTATATCTCACAAACGATGAAGAGGGGTGCCAGTCTTCCTGCTTATAGGACTTTTGCTTTGGATGAACTCAAGGAGGCTACCAACAATTTTGATGCATCATGTTTTATAAGTGAAGGTGCACGTGGTCAGATCTACAAAGGGTCGCTCTCTGATGGAACTCAGATTGCTATCAGAAGTTTGAAAATGAAGAAAAGACATGGCCCTCAGAACTATATGCATCGTATTGAATTGATTTCAAAACTGAGGCATCCACACTTGGTCAGTGCTCTGGGACATTGCTTTGAGGGCAACCACGAGGATCCAAGTGTCAACAGTATATATCTCATATTTGAGTTTGCGCCATACAAAAGTTTAAGAGGCTGCATATCTGGATCTTCTGGAGAAAAGCTTTCTTGGGCACAGAGAATAGCATCTGCAATTGGAGTTGTTAAAGGCATTCAATTTTTGCACACTGGGATAGTGCCTGGAATGTATTCAAATAATCTGAAGATAACAGATATTCTACTCGATAACAATCTCAATGTCAAAATATGCAGCTATAATCTTCCTCTATTGGCTGAAAATAAGACAATGGTACGAAATGGAACTTTATCCCCTGCAGTTAAAGGAAATGTTCAAGCAAGGACAAAGGACGGTGATAAGAATGATGTCTATGATTTTGGTGTAATCTTACTTGAAATCATTCTTGGACGTACAATCCTGTTCCATAATGAAGTTGGAACACTAAAAGATCTCTTACAAGTAAGCCTAGCAACTGATGAAATAGCTAGAAGGAGCATTGTTGATCCAGTAATTCACAAGCAATGTTCAGATGAATCAATGAAGAGAGTGATGGAGTTATGTGTGAGATGTGTCTCAGAAGATCCTACTGATAGGCCTTCTGTAGAAGACGCTCTCTGGAATCTGCAGTTTGCAGCACAGGTTCAGAATTCATGGGGAAGAGACTCCATTGATACAAGAGAATCACCTGCTTCCCCTGTCCAAGAAACACAAGGTTCCTAA	2646	0.4082	MHHTWMSMEERNNICLLTSIAIYSSIHWNKTKLEMAMAKQLLHFHHFFFVLLFFLAIHRTHQLQHSQSYALLKFQKLLGYPSALSSLRTTRDFCNIEPTSYLTIVCYEDDVTQLHVVGDNGVSPLPQDFSSDSLFATLGTLSSLKVLSLVSVGLWGPIPASIYQLSSLEILNISSNHFSGAIPTQLSLLKNLQSLVLDDNDFPGKIPIWVGSLQGLAVLSMRRNFLNGSVPASVRDLQTLRVLDLSNNHLHGELPGLSNLKNLQVLNLENNTLGPRFPSLPTKLVSLVLRNNSFRFGIPSNLSSYYQLQMLDLSLNGFVGPFLPSLLSLPSIKYLDVSANKFSGMLFSNYTCNSDILFVNLSSNLLKGELPICLEPDNKVVALYARNCFSNEDQDQHPSTFCQPEALAVNVLPHEQKQRKRTTGKAVIVSSMGGIVGGALVFGVVFLVIVRVNKKGSVKAPEGSTLEQVISQMDDKGDEVKTTRTVLSVMENIISRVPKPNKESVKTFARSMMGHVVNRVHHRHVRPARSIVEHVSSMNTAKLLTDARYISQTMKRGASLPAYRTFALDELKEATNNFDASCFISEGARGQIYKGSLSDGTQIAIRSLKMKKRHGPQNYMHRIELISKLRHPHLVSALGHCFEGNHEDPSVNSIYLIFEFAPYKSLRGCISGSSGEKLSWAQRIASAIGVVKGIQFLHTGIVPGMYSNNLKITDILLDNNLNVKICSYNLPLLAENKTMVRNGTLSPAVKGNVQARTKDGDKNDVYDFGVILLEIILGRTILFHNEVGTLKDLLQVSLATDEIARRSIVDPVIHKQCSDESMKRVMELCVRCVSEDPTDRPSVEDALWNLQFAAQVQNSWGRDSIDTRESPASPVQETQGS	881

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele31g0405	881	FunFam	Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770	282	407	-	-
	Lele31g0405	881	Pfam	Leucine Rich repeats (2 copies)	239	272	IPR025875	-
	Lele31g0405	881	ProSiteProfiles	Leucine-rich repeat profile.	239	261	IPR001611	GO:0005515
	Lele31g0405	881	Gene3D	Transferase(Phosphotransferase) domain 1	662	869	-	-
	Lele31g0405	881	FunFam	Putative inactive leucine-rich repeat receptor-like protein kinase	662	866	-	-
	Lele31g0405	881	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED	95	863	-	-
	Lele31g0405	881	FunFam	Putative inactive leucine-rich repeat receptor-like protein kinase	552	660	-	-
	Lele31g0405	881	SUPERFAMILY	Protein kinase-like (PK-like)	559	852	IPR011009	-
	Lele31g0405	881	ProSiteProfiles	Protein kinase domain profile.	578	852	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele31g0405	881	SUPERFAMILY	L domain-like	84	390	-	-
	Lele31g0405	881	Pfam	Protein tyrosine and serine/threonine kinase	584	845	IPR001245	GO:0004672\|GO:0006468
	Lele31g0405	881	Pfam	Leucine rich repeat	143	202	IPR001611	GO:0005515
	Lele31g0405	881	MobiDBLite	consensus disorder prediction	861	881	-	-
	Lele31g0405	881	FunFam	LRR receptor-like serine/threonine-protein kinase ERECTA	135	230	-	-
	Lele31g0405	881	Gene3D	Phosphorylase Kinase; domain 1	549	655	-	-
	Lele31g0405	881	Gene3D	Ribonuclease Inhibitor	229	412	IPR032675	-
	Lele31g0405	881	Gene3D	Ribonuclease Inhibitor	64	228	IPR032675	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele31g0405	Lele-ChrLele31	11544135	11551170	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele31g0405	529	864	Miscellaneous Gene Families	AT3G03770	58.284	6.11e-126	397

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-VI-1	Lele31g0405		PK_Tyr_Ser-Thr	3e-20	CL0016