Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0374 ATGGTATCCATAGACGACCACGGGTGCAGTGATGATGACGATTATAATTACTCCGATCAGGGTTCAGTGGAAGAAGAAGGCTTTGAAGAAAATTACGACGACATCGAGTTGGCCAAGGCTGAAAACAAGGGTCCCACAAGTCTGGTGATAACAAGAGAATCACTTGTCACTGCTCAGGAAGAAGATCTCCGGCGAGTAATGGAGATGCTTTCACTGAAAGAGCACTACGCTCGTGTTCTTCTCATTCATCATCGTTGGGATGCGGAGAAGCTTTTTTTAGTGTACGTAGAAAAGGGAAAAACCGTCTTGTTCGCTCAAGCCGGTCTTACTGTGTATGAACCGTCCGGTTCAGACCCATCATCATCTTCATCACTTCCTTCTTCATTGTTGTGTGAGATCTGCATCGAGAATGTTCCCAGCCACGAGGTAACAAGAATGGATTGTGGTCACTTTTTCTGCAACCATTGCTGGACACGTCACTTTATCGTTAAGATAAACGACGGCCAAAGTAAGCACATCAAATGCATGGCAGACAAATGTAATGCGATTTGCGATGAAGATGTGGTTAGAGAGCTTGTAGGTAAAGCGCGTCCCAAAACGGCGGAGAGATTCAACCGGTTTCTTCTCGAATCCTACATTGAAGACAACAAGAGAGTAAAATGGTGCCCTAGCATTCCTCATTGCGGGAATGCAATACGTGTTGAGGAAGATGATGAAGTATGTGAGGTTGAATGTTGTTGTGGTTTGCAGTTTTGTTTCAGTTGTTCGTCGGAGGCGCATTCGCCGTGTTCTTGTCGGATGTGGGAGCTATGGTCTATCAAGTTTAGAGACGAATCAGAAACTGTTAATTGGATAACAGCTCACACAAAGCCTTGCCCTAAATGCAAGAAACCAGTGGAGAAGAACGGTGGCTGCAACTGGGTTAGTTGTATCTGTGGTCAACCATTTTGCTGGTTCTGCGGCGGAGCCACCAGCAGGGAACATACATGGTTAACTATAACCGGCCATAGTTGTGGCCGTTACAAGCCACAAGAAGAACTAGCAGAACTTGCCAAGCGAAATCTGGATCGATATATGCATTATCATGATCGATACAAAGCGCACACAGATTCGTTGACACTTGAAGGTAAGTTGAAAGAAACCATACAAGAGAAGGTTGCGAATTCAGAATCGAAGGTGGATGATTCGATTCTAAGAGATTATAGCTGGGTTAGTAATGGACTCTCGAGACTGTTCAGATCGAGGCGTGTGTTATCATATTCGTACCCATTTGCATATTATATGTTTGGAGGTGAGATTTTTAAGGAACAGATGTCTGAAGAGGAGAGGGAAAGGAAACAGAACTTGTTTGAGGATCAGCAGCAGCAACTTGAAGCAAATGTTGAGAAGCTTTCAAAATTTCAGGAGGAACCCTTTGATGAGTATGAAGATGATGAAGTATTGAAAATAAGGATTCAAGTGATTAACCTCTCAAAGGTTGTGGATAATCTGTGCCAGAAAATGTATGAGTGCATTGAGAATGATTTATTGGGTTCAATTCATATTAATATTGCTCCTTACAAATCAGAGGGTGTAGAGAAGGCATCTCAATTGTAA 1596 0.4317 MVSIDDHGCSDDDDYNYSDQGSVEEEGFEENYDDIELAKAENKGPTSLVITRESLVTAQEEDLRRVMEMLSLKEHYARVLLIHHRWDAEKLFLVYVEKGKTVLFAQAGLTVYEPSGSDPSSSSSLPSSLLCEICIENVPSHEVTRMDCGHFFCNHCWTRHFIVKINDGQSKHIKCMADKCNAICDEDVVRELVGKARPKTAERFNRFLLESYIEDNKRVKWCPSIPHCGNAIRVEEDDEVCEVECCCGLQFCFSCSSEAHSPCSCRMWELWSIKFRDESETVNWITAHTKPCPKCKKPVEKNGGCNWVSCICGQPFCWFCGGATSREHTWLTITGHSCGRYKPQEELAELAKRNLDRYMHYHDRYKAHTDSLTLEGKLKETIQEKVANSESKVDDSILRDYSWVSNGLSRLFRSRRVLSYSYPFAYYMFGGEIFKEQMSEEERERKQNLFEDQQQQLEANVEKLSKFQEEPFDEYEDDEVLKIRIQVINLSKVVDNLCQKMYECIENDLLGSIHINIAPYKSEGVEKASQL 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0374 531 SUPERFAMILY RING/U-box 128 214 - -
Lele31g0374 531 FunFam RBR-type E3 ubiquitin transferase 261 510 - -
Lele31g0374 531 ProSiteProfiles TRIAD supradomain profile. 127 342 IPR044066 -
Lele31g0374 531 Pfam IBR domain, a half RING-finger domain 202 265 IPR002867 -
Lele31g0374 531 SMART ibrneu5 273 338 IPR002867 -
Lele31g0374 531 SMART ibrneu5 202 265 IPR002867 -
Lele31g0374 531 FunFam RBR-type E3 ubiquitin transferase 126 216 - -
Lele31g0374 531 Gene3D - 261 510 - -
Lele31g0374 531 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 126 216 IPR013083 -
Lele31g0374 531 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 54 419 IPR031127 GO:0004842|GO:0016567
Lele31g0374 531 ProSiteProfiles Zinc finger RING-type profile. 131 179 IPR001841 -
Lele31g0374 531 Coils Coil 450 470 - -
Lele31g0374 531 SUPERFAMILY RING/U-box 276 331 - -
Lele31g0374 531 Pfam Ariadne domain 344 531 IPR045840 -
Lele31g0374 531 SUPERFAMILY RING/U-box 202 272 - -
Lele31g0374 531 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0374 Lele-ChrLele31 11104234 11105829 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0374 67 531 ARIADNE family AT2G16090 69.296 0.0 667