Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0365 ATGATTACTGTGATTTCTTCTTTTCAGGTACCATTGAATATAATCAGGCAGCAAATTGTTATTCTCATCATGGATATAGATCTTAGGTTACCTTCTGGTGAACATGATAAAGAGGCTGAAAAGCCAAATACAATTGATAACATATTGGATGGTGATGAAAAATTGCATAATGTAGATATAGAAGGAAGAAATATAGTTGATGCTGGTGTACCTGCTCTAGATGGTGGAGATTTGAACTCACCAACATTGGATATGGAAATATTTAAGGAAGATACAAATCTTGAACCACTTTCTGGCATGGAATTTGATTCTCATGGGGAAGCTTATTCTTTCTACCAAGAGTATGCTCGGTCAATGGGATTCAATACTGCGATTCAAAATAGTCGTCGTTCAAAAACATCAAGAGAATTTATAGACGCAAAGTTTGCTTGTTCCAGATATGGAACTAAACGGGAGTATGACAACAAATCATTCAATCGACCACGAGCACGACAGAATAAGCAGGAGTCTGAAAATTCAACTGGCAGGAGATCTTGTTCAAAGACTGATTGTAAAGCAAGCATGCATGTAAAAAGAAGGTCAGATGGAAAATGGGTTATACATAGTTTTGTGAAGGAGCATAATCATGAGCTTTTTCCCGCCCAAGCTGTCAGTGAACAAGCAAGGAAAATGTATGCTGCAATGGCTAGACAGTTTGCTGAATACAAAACTGTAGTTGGTCTAAAAATTGAGAAAAGCCCATTTGATAAAGGTCGGAATTTAGGCCTAGAGACAGGGGATGTCAAACTTCTGCTTGACTTCTTCATACAGATGCAAAACATGAATTCTAACTTCTTTTATGCTGTAGACATTGGTGAGGATCAACGGGTGAAAAGCCTTTTATGGCTTGATGCTAAATGTAGGCATGACTATATGAACTTTTATGATGTAGTTTCTTTTGACACAACCTATGTGAGAAACAAATATAAGATGCCTCTTGCACTTTTTGTTGGAGTAAATCAGCATTATCAATTTATGTTGCTCGGGTGTGCTTTGATATCGGATGAAACGGCCACAACTTATTCTTGGCTAATGCAGACGTGGCTGAAAGCAGTTGGTGGTCAAGTTCCAAAAGTGATCATTACTGACCATGACAAGACACTCAACTCAGTTATTTTAGATGTCTTCCCCCGTTCTCATCATTGTATGTGCCTATGGCACATATTGGGGAAGGTAACTGAAAATTTAGGTCATGTCATTAAACAACATGAGAATTTTATGGCAAAATTTGAAAAATGCATCCATAGGTCATGGACAAGTGATGAGTTTGAGAAGAGGTGGTGGAAAATGGTAGACAGGTTTGATCTCCGAGAGGACAATTCCATGCAGACATTGTATGAAGATTGCAAGTTGTGGGTGCCAACATTCATGAAGGATGTATTTTTAGGTGGTATGTCTACCATCCAGCGATCTGAAAGTATAAATTCCTTCTTTGATAAATATGTTCACAAGAAGACCTCTGTACAAGATTTTGTCAGACAGTATGAAACAATATTGCAAGACAGGTACGAAGAGGAAGCAAAAGCAGATTCTGATACTTGGAATAAAGTGGCAACATTGAAAACTCCTTCACCTTTAGAGAAGAGTGTTGCTGGAATTTACACACATGCAGTATTTAAGAAGATTCAGGTTGAGGTTATTGGTGCAGTTGCTTGTCATCCTAAAGCTGAAAGACGGGATGGGGCAAGCATTACTTACAAGGTTCATGATATGGAAAGGAATCAAGAATTCACAGTTGTGCTGAATGAACTAACATCAGAGGTGTCTTGTATATGTCAGTTATTTGAATATAAAGGTTATCTTTGTCGACATGCATTGATTGTTCTACAATATTCTCGCCTTTCGGCAATTCCTTCTCAATATATTTTGAAAAGGTGGACAAGAGATGCAAAGTCAAGAAATTTACTTGGGGAAGAATCTGAACATATGCTGGGTAGGGTGCAACGGTACAATGATTTATGTCAGAGAGCACTTAAACTGGGCGAAGAGGGATCTCTGTCTCAAGAGAGTTATAGTATTGCATTCCATGCATTTCATGAGGCATATGCAAGTTGTGTGAGTGTCAACAATTCCGGTAAAGATCCTCCAGAAGCAGGCACGTCAGCTGGTCATGGTCAGCTTTCCACTGAAGAAGATACCCAGAGTAAAAATATGGGCAAGACAAACAGAAAAAAGAACCCAGCTAAAAAGAAAAAGTTGAACTCTGAGGCAGAAGTGATGACTGTTGGGTCTCAAGACAACTTGCAACAAATGGACAAGTTCAGCGCAAGGGCTGTAACACTTGATGGTTATTATGGTGCTCAACAGAGTGTACAGGGAATGTTAAACTTGATGGGACCAACTCGTGATAATTACTATGGAAATCAACAGACTATTCAGGGCCTGGGACAATTAAGTTCTATACCACCAAGCCACGATGGTTATTACGGTGCTCATCAGAGCATGCCTGGTCTGGCACAACTGGATTTTTTCCGATCATCAACAGGTTTCGCATATGGCATTCGGGATGATCCTAACGTAAGAGCAGCACAGTTGCATGAGGATCCATCAAGACATGCATGA 2601 0.3933 MITVISSFQVPLNIIRQQIVILIMDIDLRLPSGEHDKEAEKPNTIDNILDGDEKLHNVDIEGRNIVDAGVPALDGGDLNSPTLDMEIFKEDTNLEPLSGMEFDSHGEAYSFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDNKSFNRPRARQNKQESENSTGRRSCSKTDCKASMHVKRRSDGKWVIHSFVKEHNHELFPAQAVSEQARKMYAAMARQFAEYKTVVGLKIEKSPFDKGRNLGLETGDVKLLLDFFIQMQNMNSNFFYAVDIGEDQRVKSLLWLDAKCRHDYMNFYDVVSFDTTYVRNKYKMPLALFVGVNQHYQFMLLGCALISDETATTYSWLMQTWLKAVGGQVPKVIITDHDKTLNSVILDVFPRSHHCMCLWHILGKVTENLGHVIKQHENFMAKFEKCIHRSWTSDEFEKRWWKMVDRFDLREDNSMQTLYEDCKLWVPTFMKDVFLGGMSTIQRSESINSFFDKYVHKKTSVQDFVRQYETILQDRYEEEAKADSDTWNKVATLKTPSPLEKSVAGIYTHAVFKKIQVEVIGAVACHPKAERRDGASITYKVHDMERNQEFTVVLNELTSEVSCICQLFEYKGYLCRHALIVLQYSRLSAIPSQYILKRWTRDAKSRNLLGEESEHMLGRVQRYNDLCQRALKLGEEGSLSQESYSIAFHAFHEAYASCVSVNNSGKDPPEAGTSAGHGQLSTEEDTQSKNMGKTNRKKNPAKKKKLNSEAEVMTVGSQDNLQQMDKFSARAVTLDGYYGAQQSVQGMLNLMGPTRDNYYGNQQTIQGLGQLSSIPPSHDGYYGAHQSMPGLAQLDFFRSSTGFAYGIRDDPNVRAAQLHEDPSRHA 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0365 866 Pfam MULE transposase domain 310 402 IPR018289 -
Lele31g0365 866 Pfam FAR1 DNA-binding domain 110 213 IPR004330 -
Lele31g0365 866 Pfam SWIM zinc finger 592 624 IPR007527 GO:0008270
Lele31g0365 866 ProSiteProfiles Zinc finger SWIM-type profile. 590 626 IPR007527 GO:0008270
Lele31g0365 866 MobiDBLite consensus disorder prediction 706 728 - -
Lele31g0365 866 SMART 26again6 601 628 IPR006564 GO:0008270
Lele31g0365 866 MobiDBLite consensus disorder prediction 153 186 - -
Lele31g0365 866 MobiDBLite consensus disorder prediction 706 749 - -
Lele31g0365 866 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 90 698 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0365 Lele-ChrLele31 10850004 10853424 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lele31g0365 FAR1 5.8e-27 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g1197 29 14174637 14179481 Lele31g0365 31 10850004 10853424 hybridization