Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0357 ATGCCATTCCTTCCTTTCTTCTCTTCTCTTCTCTTTCTCTTCTTCCTCTTCTTCACACCGCCATTATTGCTCCTAGCTCAACCTTCTCCTCCTCCGTTTCCTGCTTCTCCCTCTGAGTCCTGCAAGTCCACATTATACCCAAAACTTTGTCGTTCCATTCTCTCAGCCATTCGCTACTCACCGTCAGATCCTTACTCACTTGGCAAATTCTCAATCAAGCAAAGTCTTAAACAAGTCAAGAGACTCGTCAAAGTGTTCAACAAATTCCTCAAAAAGCAAAATGGTTCCTCTTCTTCTCTGAACCGCGACGAGATTGCGGCTTTGGTTGACTGTATGGAGCTGAACCAGCTCAACGTAGATTACTTGGAGTCCGTCAAGTCAACGCTGAAGTTGGTGGAGGCATCGAGCCCGGAGCTGGTGGAGGAGATCCAGACGCATCTCAGCGCGGTGGTGACGAACCAAGACACTTGTTACGACGGTTTGGGGGCGGCTCAGAGCGGTATTGCTAAGGCACTGAACGTTCCGATGAACAATATGAGCCAGTTGTATAGTGTTTCGCTAGGGTTGGTCACTCATTCTTTGAACAGATATATGAAGAAGCAGAAGGTTGGCAAACATGGCCTTCCTAGCCAGGCTAACAAAGTCAGACAGCCACTTGAGAAGCTTGTGAAGCTTCTTCGGGGAAAGTATGGTTGCGAGGAGTCATCGAATTGCAACAGGAAGGAAAGGATTATGCAAGAAAGCCAAGAGAAAGGGATTTTGTTGAATGAGTTCGTTGTCGTGAGCCCTTCTGGTTCCGACAATTTCACGTCGATCGGAGATGCCATTGCCGCCGCTCCGAGCTACACAAACCCTCAGGATGGCTACTTCCTCATATACGCAAAAGAGGGATACTACAAGGAATACGTTGTGGTTCCAAGTGACAAGAGGAATGTATTGCTCATTGGTGATGGCATTGGTCGCACTGTCATTACAGGCAATCACAATGTTGTTGATGGTTGGACTACTTACAATTCTTCCACATTTGCTGTGTCTGGACAACGATTCGTAGCAGTGGATGTTACATTCAGGAACACAGCAGGCCCAGAGAAGCATCAAGCAGTAGCAGAGTATTCTCGAACGGTGGTTATGGAGTCGTTTATCGGAGACTTTGTTCAACCTTGTGGGTGGTTAGAGTGGAATGGGACCTTAGGGTTAGATACTTTGTTTTATGGTGAGTTTGGTAATTATGGACCTGGGGCTAATACAGGTAAGAGAGTTCAATGGGGAGGGTATTCTGTTTTGAATGCTGAACAAGCTTTTAACTTTACTGTGTCTAAGTTTACTTTGGGAGAGACTTGGATTCCTTATGCGGATATACCTTTCAAGGGAGGATTGTTGGGTTAA 1386 0.4625 MPFLPFFSSLLFLFFLFFTPPLLLLAQPSPPPFPASPSESCKSTLYPKLCRSILSAIRYSPSDPYSLGKFSIKQSLKQVKRLVKVFNKFLKKQNGSSSSLNRDEIAALVDCMELNQLNVDYLESVKSTLKLVEASSPELVEEIQTHLSAVVTNQDTCYDGLGAAQSGIAKALNVPMNNMSQLYSVSLGLVTHSLNRYMKKQKVGKHGLPSQANKVRQPLEKLVKLLRGKYGCEESSNCNRKERIMQESQEKGILLNEFVVVSPSGSDNFTSIGDAIAAAPSYTNPQDGYFLIYAKEGYYKEYVVVPSDKRNVLLIGDGIGRTVITGNHNVVDGWTTYNSSTFAVSGQRFVAVDVTFRNTAGPEKHQAVAEYSRTVVMESFIGDFVQPCGWLEWNGTLGLDTLFYGEFGNYGPGANTGKRVQWGGYSVLNAEQAFNFTVSKFTLGETWIPYADIPFKGGLLG 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0357 461 SUPERFAMILY Pectin lyase-like 257 457 IPR011050 -
Lele31g0357 461 Gene3D - 255 370 IPR012334 -
Lele31g0357 461 TIGRFAM PME_inhib: pectinesterase inhibitor domain 36 191 IPR006501 GO:0004857
Lele31g0357 461 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 193 IPR035513 -
Lele31g0357 461 Pfam Pectinesterase 370 444 IPR000070 GO:0030599|GO:0042545
Lele31g0357 461 Pfam Pectinesterase 259 369 IPR000070 GO:0030599|GO:0042545
Lele31g0357 461 Gene3D - 371 461 IPR012334 -
Lele31g0357 461 CDD PMEI-like_3 41 192 - -
Lele31g0357 461 Pfam Plant invertase/pectin methylesterase inhibitor 38 188 IPR006501 GO:0004857
Lele31g0357 461 PANTHER PECTINESTERASE 370 449 - -
Lele31g0357 461 SMART PMEI_2 32 189 IPR006501 GO:0004857
Lele31g0357 461 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 192 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0357 Lele-ChrLele31 10606016 10610685 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0357 371 460 Carbohydrate Esterase AT3G10720 67.778 7.44e-39 147