Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0348 ATGAGAGTAACCAAGGAAGCGCTGGTGGAGTCGTCTCTAAGAAAGGGCCATGCAGATGCTATTTTAGTGGACTATGTCAGGAAGCATGGAGAGGGCAACTGGAATGCTGTTCAGAAGTATACAGGCCTGTCTAATCTAAAGAAAGGTGCATTTACTGCAGAAGAAGAGCAGCTAATTGCTGAACTGCATGCTAAGATGGGAAACAAATGGGCACGCATCGCTGCATATTTACCTAGTCCGACAGATAATGAGATCAAGAACTACTGGAATACCCGAATCAAGAGGCGACAACGAACTGGCTTGCCACTTTATCCCCCTGAAGTATGTTTGCAATCAATGCAAGAGAGGCAGCAAGGCCACCAGAGTGTTGGAATTAATGGTATTGAAAGAGGAAATCGTCACTTAATGGCAAAAAACAATGATGAGATACAGAATGTTATAGTCAATAGTCAGGAGTTCTTAACTTATGTGCCCAAGGGTCTTGATGTATTTCCTAATAGCATTCTGCTGGAAGGTTTTGGCTCATCTCCAAATAGTAATATCCTGCCATCGGCATTACCTCACCATAAACACCTTGGAGGGTCAACAATGCCGTTTCTTGGTTCCAACAGTATTAACAAAAATGGATCTTATCCATTTGACCATGCTCGGAATAATGCTTCAGATATGATTGCACGATCATTTGGAACGCATTCCACTCTTGATCATGGCCCCTCCTCACAGAGTTCTTTGTGTTACAGCCATTCCCTGTTGAATGGCTATTCCTCTACTTCTAAGCCAGCTTGGAGCTCCCTTCATTCCAATATCCAGCAACTGATTTTTGAGAAAGCTAGCGGTTCAACGTTGGACGTGTACAATACAGAATGGGATTACTACATTGACCCTGTTTCATCATTTGGTGCAACATCAATCTTAAATGAATGCCCTGCTATTTGTGCCGATCAATCCTTCTTGGATGTACTACCGCCCGCACAGGCCTCAAGTGGGGACATCGGGAAATTACCTTCGGTTGACCAGGATTGGACCCCCAACAGTGAAGATAAAATCCTGTCCATGTTGGATATTGCTAAGCCAGATGTCTTACTCACTTCATATTGGTTTGACCATGGTTCTGATGTTGTTACAACACTGAGTAATGATTTCGCAACTTCTACATCAAGTAAAGTGCGTGGTAATGGTTCTGGTGCATGGAATAACGCCCTACTGTTTTTCAAGTCTCTGACCTTCCTTCAGAAACTGACATGA 1245 0.4337 MRVTKEALVESSLRKGHADAILVDYVRKHGEGNWNAVQKYTGLSNLKKGAFTAEEEQLIAELHAKMGNKWARIAAYLPSPTDNEIKNYWNTRIKRRQRTGLPLYPPEVCLQSMQERQQGHQSVGINGIERGNRHLMAKNNDEIQNVIVNSQEFLTYVPKGLDVFPNSILLEGFGSSPNSNILPSALPHHKHLGGSTMPFLGSNSINKNGSYPFDHARNNASDMIARSFGTHSTLDHGPSSQSSLCYSHSLLNGYSSTSKPAWSSLHSNIQQLIFEKASGSTLDVYNTEWDYYIDPVSSFGATSILNECPAICADQSFLDVLPPAQASSGDIGKLPSVDQDWTPNSEDKILSMLDIAKPDVLLTSYWFDHGSDVVTTLSNDFATSTSSKVRGNGSGAWNNALLFFKSLTFLQKLT 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0348 414 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 97 IPR017930 -
Lele31g0348 414 Gene3D - 50 96 - -
Lele31g0348 414 SMART sant 47 95 IPR001005 -
Lele31g0348 414 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 14 326 - -
Lele31g0348 414 CDD SANT 50 91 IPR001005 -
Lele31g0348 414 SUPERFAMILY Homeodomain-like 19 89 IPR009057 -
Lele31g0348 414 ProSiteProfiles Myb-like domain profile. 43 93 IPR001005 -
Lele31g0348 414 Pfam Myb-like DNA-binding domain 48 91 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0348 Lele-ChrLele31 10127729 10131599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0348 12 399 MYB Transcription Factor Family AT5G06100 32.172 1.94e-53 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele31g0348 Myb_DNA-binding 7.7e-14 CL0123