Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0347 ATGGTTCAGTTGCATTATATTCTTGCAATGGCACTTGATGATCATGGTGTTAAGTATTCTTCAAGCTGTTGTCGTCGTTCAAATAGGAGACTCAAGTATGATGTGTTTTTAAGTTTTCGAGGAGAAGACACTCGAAAAGGTTTTACAGACCACTTATATGCTGCTTTGCATGCCAATGGACTGATAACTTTTAGAGATGAGGAAGAGCTTGAAAGGGGACAAATTATCAAACCAAGTTTGCATGAAGCAATTGAAGAATCTTTTTCTGCAATTGTTGTACTCTCTAAAAACTATGCTACTTCAACATGGTGTTTAGATGAGCTCCTAAAGATCCTTCATTCTAAGAAAGAGTTGGCACTTCATATATTTCCAATCTTCTATGGCGTAGTTCCTTCTGATGTTCGTCATCAAACAGGAAGTTTTGTTGAAGCCTTTGAAAATCATGAACAAAAATTTGCACATGACAAATTGAAGGTGCAAAGATGGAGGGATGCTTTAAAAGAACTTGCTGACTTAGCTGGCTGGAACTCTCAAGATTGGTATGAATCGAAACTCATTAAAATTGTTGTTGAAATGGTGAGGTCAAAATTAGATGATCAACCACTGTTCAACTCAAATAATGATAAACTTGTTGGAATTGATGTAAAAATAGCAGAGTTCGATTCTTTTCTAGAAAATACATTGGAGGAAGTTCAAATTTTAGGGATATGGGGAATGGGAGGGTTAGGGAAAACTACTCTTGCCAGAGTCGTTTACGAGAGAACACATAAAGACTTTGAAGTTCATTGCTTTCTTCAAAATGTTCGAGAGTTATCTACAAAAGAAGATGGTTTGTTTTTTTTGCAAAGAAAACTTCTTTCGCATTTAAAAATCCGAATCAATATGAAAGTCGGTGATTGTTATGAAGGAAGGAAGATGATAAAAAGAATGTTATGCAATAAAAAAGTGCTACTTGTTCTTGATGATGTGAGTGACATAAGCCAACTGGAGAATTTGGCGGGAAAGGAAGGATGGTTTGGCGAAGGGAGTAAAATAATAATAACAACTAGAGATCAGCGTCTGTTATTGTTCCATCGTGCAGTTTCTCAATATAAAATGAATTTCTTAAGTAATGAAGAATCCCTTCAACTTTTTCTTCACATAGCTTTTAAAGGAGATAAACCAAATGAAGATTATTTGGAGCTTTCTAAAATGGTAATTAAATCTGCTAAAAATCTTCCTTTGGCAATCAAAGTGTTTGGTTCATTTCTATGTGGAAGAAATATACCAGAATGGGAAGATGCACTCAAGAAGATTCATTCATCAGATCACATTTTTAATATACTTAAAGTGAGCTTTGATGGACTAGAATATAATGAGAAGAATATATTCTTAGATATTGCTTGCTTTTTCAATGGGATGGCCAAGGATAATGTAATACAAATTTTAGAAAATAGTGGTCTTCGCCCAATAATTGGAATAGGAGTTCTTATTGAGAAATCATTGGTAATTGGAGATGAAGGATGCTTGAGGGTGCATGACATGCTTCAAGAAATGGGTAAGGAAATTGTTTTTCGTGAATCACCCAATGATGCTGGCAAACGTAGTAGGGTTTGGTCCTTGGAGGATGCTAATCATGTGTTGGGAAATAAGAGGGGAACTGAAGCAATCCGTGGGATAGCAGTAAGATTTGACAAACCGTATGTCTTACATTTGGACCCTGAAGCCTTCTCAAATATGAGTAATCTCAAGTTACTTGTCATATCCAGTCATTCACCTTCTTCACATGGCCAATTGAATCTTCAATCCCTCGAGTCCCTTCCCAACACATTGAAAGTCATAGAATGGAAAGGGTATCCTCTAAATGCTTTGCCAAGTCAACCTAAATTAAATGAACTTGTTGATTTTAAAATGCAACACAGCAAGTTAAAAGAACTTTGGAGAGGAACTCAGTTTCTACAGAGTTTGAAGTTCATTGATTTGAGTCATTCAACAAACCTGATCAGAACACCAAATTTTGGTAAAACTCCTAATCTTCAAAGATTAATTCTTGAAGGGTGTACAAAGCTTGTTGAAGTCCACCATTCTCTTGGGCAACACACTTGTCTTGTCATTGTTGATTTTAAAGGCTGCAAAAATTCGAAGCCAAAGTGA 2133 0.3582 MVQLHYILAMALDDHGVKYSSSCCRRSNRRLKYDVFLSFRGEDTRKGFTDHLYAALHANGLITFRDEEELERGQIIKPSLHEAIEESFSAIVVLSKNYATSTWCLDELLKILHSKKELALHIFPIFYGVVPSDVRHQTGSFVEAFENHEQKFAHDKLKVQRWRDALKELADLAGWNSQDWYESKLIKIVVEMVRSKLDDQPLFNSNNDKLVGIDVKIAEFDSFLENTLEEVQILGIWGMGGLGKTTLARVVYERTHKDFEVHCFLQNVRELSTKEDGLFFLQRKLLSHLKIRINMKVGDCYEGRKMIKRMLCNKKVLLVLDDVSDISQLENLAGKEGWFGEGSKIIITTRDQRLLLFHRAVSQYKMNFLSNEESLQLFLHIAFKGDKPNEDYLELSKMVIKSAKNLPLAIKVFGSFLCGRNIPEWEDALKKIHSSDHIFNILKVSFDGLEYNEKNIFLDIACFFNGMAKDNVIQILENSGLRPIIGIGVLIEKSLVIGDEGCLRVHDMLQEMGKEIVFRESPNDAGKRSRVWSLEDANHVLGNKRGTEAIRGIAVRFDKPYVLHLDPEAFSNMSNLKLLVISSHSPSSHGQLNLQSLESLPNTLKVIEWKGYPLNALPSQPKLNELVDFKMQHSKLKELWRGTQFLQSLKFIDLSHSTNLIRTPNFGKTPNLQRLILEGCTKLVEVHHSLGQHTCLVIVDFKGCKNSKPK 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0347 710 ProSiteProfiles TIR domain profile. 31 197 IPR000157 GO:0007165
Lele31g0347 710 FunFam Disease resistance protein (TIR-NBS-LRR class) 29 199 - -
Lele31g0347 710 SUPERFAMILY "Winged helix" DNA-binding domain 437 541 IPR036390 -
Lele31g0347 710 Pfam Leucine Rich Repeat 626 644 IPR011713 -
Lele31g0347 710 Pfam NB-ARC domain 229 436 IPR002182 GO:0043531
Lele31g0347 710 SMART till_3 32 172 IPR000157 GO:0007165
Lele31g0347 710 SUPERFAMILY L domain-like 561 705 - -
Lele31g0347 710 Gene3D - 201 361 IPR027417 -
Lele31g0347 710 Gene3D - 368 450 IPR042197 -
Lele31g0347 710 Pfam TIR domain 32 213 IPR000157 GO:0007165
Lele31g0347 710 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 33 705 IPR044974 GO:0006952
Lele31g0347 710 Gene3D Ribonuclease Inhibitor 562 709 IPR032675 -
Lele31g0347 710 Gene3D - 27 200 IPR035897 -
Lele31g0347 710 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 200 460 IPR027417 -
Lele31g0347 710 PRINTS Disease resistance protein signature 403 417 - -
Lele31g0347 710 PRINTS Disease resistance protein signature 233 248 - -
Lele31g0347 710 PRINTS Disease resistance protein signature 644 660 - -
Lele31g0347 710 PRINTS Disease resistance protein signature 310 324 - -
Lele31g0347 710 SUPERFAMILY Toll/Interleukin receptor TIR domain 25 175 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0347 Lele-ChrLele31 10072004 10076858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0347 211 708 WRKY Transcription Factor Family AT5G45050 36.138 5.11e-82 281