Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0345 ATGGGCCGGCCCATAACGCATTATGCCGTGCCTAAGGCACATAAGTTCATAGATTCTAAACGATGTCGTTTAGAAAGCTTCGCGTCCTCCACGGTTCTCTCTGCTTCAGCCATGGCTACTGCGAGGACTGTCAAGGATGTTTCGCCTCACGAGTTCGTCAAGGCCTACGCGGCTCACCTGAAGAGATCCGGCAAGATGGAGCTTCCTGAGTGGACTGATTTAGTAAAGACTGCAAGATTTAAAGAATTGGCTCCTTATGATCCTGATTGGTACTATGTTAGGGCTGCCTCCATGGCCAGAAAAATCTACATGAGAGGGGGCCTTGGTGTTGGTGGTTTCCAGAGGATCTATGGTGGGAGCAAGAGGAATGGTAGCCGTCCTCGTCATTTTTGTAAGAGCAGCGGTTCTATTGCTCGTCACATTCTTTATCAGTTGCAGAACATGGACATTATTGAGGCCGACCCTAACGGTGGCAGAAGAATTACTTCTAGCGGTCGGAGGGATCTTGATCAAGTCAGTGGTCGGATTGCGGCTGCACCTTGA 543 0.4972 MGRPITHYAVPKAHKFIDSKRCRLESFASSTVLSASAMATARTVKDVSPHEFVKAYAAHLKRSGKMELPEWTDLVKTARFKELAPYDPDWYYVRAASMARKIYMRGGLGVGGFQRIYGGSKRNGSRPRHFCKSSGSIARHILYQLQNMDIIEADPNGGRRITSSGRRDLDQVSGRIAAAP 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0345 180 Gene3D - 20 179 IPR036388 -
Lele31g0345 180 MobiDBLite consensus disorder prediction 155 180 - -
Lele31g0345 180 Pfam Ribosomal protein S19e 43 177 IPR001266 GO:0003735|GO:0005840|GO:0006412
Lele31g0345 180 SMART Ribosomal_S19e_2 43 179 IPR001266 GO:0003735|GO:0005840|GO:0006412
Lele31g0345 180 FunFam 40S ribosomal protein S19 39 180 - -
Lele31g0345 180 SUPERFAMILY "Winged helix" DNA-binding domain 43 177 IPR036390 -
Lele31g0345 180 PANTHER 40S RIBOSOMAL PROTEIN S19 37 178 IPR001266 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0345 Lele-ChrLele31 9184745 9187109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0345 38 179 Cytoplasmic Ribosomal Protein Gene Family AT5G61170 80.986 1.76e-87 251