Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0335 ATGGTAATTACAACAATCATGACACACAAATCCTCGTTTCTTCTCTCATCCTTCTTCCACTTTCTCTCCTTACTTATTGCAGCCCATGCAACAGGCTTCAGCTCAATAATACTAAATCCATCTCCACAACGAACACTACAAGAAAACAGCGTTTTTCTTGCAGAACAAAACGCAGAGCCGCCTGATTATCGGTATGCATGTTTGGACCAAAGTGGTGTAGCTCCATCAAGCAAATACCAAAGCAATCTCAAGAGTCTCATATCTTCACTTTCTTCTGATGCTTCAACCAGTAATGGATTTGGTAACAGAACTGCAGGTAGTGATGAAGATATGGTGTTTGGGCTTTATCTTTGTAGAGGGGATGTGAATTCAAGTTTGTGTCATTCTTGTGTTCAAGATTCTAGCAGATTGATCCAACAACATTGTCCCAACAATGCTACTGCAGTTTTATGGTACCCATTTTGCCTTCTCAGGTACTCAAACCAGAATTTCATCGGCAATCTAACACTAAGACCTCGGATTCCCATGTTTGATGCATCACAAAACTTCACAAGTGCAGGAGAGTTTGACAGTGATGCTAGGATTCTGATGAACGGTTTGATTCAGACAGGTTCGGAGACAAACCTAATGTTTGGGACACACGTGTTCAACATAAATGGCACCCAGAAAAGGTATGGTTGGGTTCAGTGCAGCCGAGACATAACCAGTGAAGAGTGCAGAACATGTCTCGGCAATATGCTTGAAGCTGTTGAGAATTGCTGTGAAGGCAAGAGGGTTTGGAGAATCTTTTCTCCTAGTTGTATTGTCATGTATGAGACTCAGCCTTTCTTTGTAAATAACACTGGGTTGATTTTTCCAACATCCCAGCCAGGTGAGGAAAGTAGTAACAGGTCAATGCTTATAGTCATCATCGTTATAAGTGTAGTAGTAGTACTAGCTGTACTGGTTTTCTGCAGAATCTACTTCAGGTTCTTGAGAAAGAATAAAGACAAACAAGCTGTGAAGGAAGATGGGCTAAATCCAGTATTTTCTCAAGATCAAACTGACGAAGAGAATGCTATGAGTGCTGTCCTTTCTATGATGTCCTTGAAAACTATTCTTGAAACTACTTGTAACTTTTCTGATGAGTTTAAATTGGGAAAAGGTGGATTTGGCTCTGTTTACAAGGGTGTTTTACCTGATGGGAAGGAAATAGCAGTAAAAAGGCTTTCAAAAACTTCAGGGCAAGGATTAAAAGAGTTCAAGAATGAAGTGATATTGATTGCAAAATTGCAACATCGGAACCTTGTGAGATTATTAGCCTGCTGCATCGAGGAAAATGAAAAGCTACTTGTTTATGAGTACATGCCTAATTCAAGCCTCGATTTTCACCTCTTCAAGAGGCGTTCCAAGTTGGAATGGAATCTGCGATTGAGTATTATTAATGGAATTGCAAAAGGTCTTTTATATCTCCATGAAGATTCTAGATTGAGGGTTATTCACAGGAATCTAAAAGCTAGTATTCTGTCAGTTTCCTGA 1518 0.3986 MVITTIMTHKSSFLLSSFFHFLSLLIAAHATGFSSIILNPSPQRTLQENSVFLAEQNAEPPDYRYACLDQSGVAPSSKYQSNLKSLISSLSSDASTSNGFGNRTAGSDEDMVFGLYLCRGDVNSSLCHSCVQDSSRLIQQHCPNNATAVLWYPFCLLRYSNQNFIGNLTLRPRIPMFDASQNFTSAGEFDSDARILMNGLIQTGSETNLMFGTHVFNINGTQKRYGWVQCSRDITSEECRTCLGNMLEAVENCCEGKRVWRIFSPSCIVMYETQPFFVNNTGLIFPTSQPGEESSNRSMLIVIIVISVVVVLAVLVFCRIYFRFLRKNKDKQAVKEDGLNPVFSQDQTDEENAMSAVLSMMSLKTILETTCNFSDEFKLGKGGFGSVYKGVLPDGKEIAVKRLSKTSGQGLKEFKNEVILIAKLQHRNLVRLLACCIEENEKLLVYEYMPNSSLDFHLFKRRSKLEWNLRLSIINGIAKGLLYLHEDSRLRVIHRNLKASILSVS 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0335 505 Pfam Salt stress response/antifungal 181 273 IPR002902 -
Lele31g0335 505 Pfam Salt stress response/antifungal 73 162 IPR002902 -
Lele31g0335 505 ProSitePatterns Protein kinases ATP-binding region signature. 379 401 IPR017441 GO:0005524
Lele31g0335 505 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 70 500 - -
Lele31g0335 505 FunFam Cysteine-rich receptor-like protein kinase 28 63 163 - -
Lele31g0335 505 Pfam Protein tyrosine and serine/threonine kinase 378 499 IPR001245 GO:0004672|GO:0006468
Lele31g0335 505 Gene3D - 62 164 IPR038408 -
Lele31g0335 505 Gene3D - 175 276 IPR038408 -
Lele31g0335 505 ProSiteProfiles Protein kinase domain profile. 373 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0335 505 FunFam Cysteine-rich receptor-like protein kinase 10 174 276 - -
Lele31g0335 505 Gene3D Phosphorylase Kinase; domain 1 336 448 - -
Lele31g0335 505 Gene3D Transferase(Phosphotransferase) domain 1 449 504 - -
Lele31g0335 505 FunFam Os07g0541700 protein 449 505 - -
Lele31g0335 505 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 340 448 - -
Lele31g0335 505 ProSiteProfiles Gnk2-homologous domain profile. 61 164 IPR002902 -
Lele31g0335 505 SUPERFAMILY Protein kinase-like (PK-like) 350 500 IPR011009 -
Lele31g0335 505 ProSiteProfiles Gnk2-homologous domain profile. 171 276 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0335 Lele-ChrLele31 6844898 6848615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0335 61 500 Receptor kinase-like Gene Family AT4G05200 36.739 1.43e-97 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele31g0335 PK_Tyr_Ser-Thr 4.1e-22 CL0016