Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0329 ATGAGGAAGAGGCTTGATACCCGTTTTCCTGCTGCTCGAATAAAGAAGATAATGCAAGCGGATGAAGATATTGGAAAAATAGCACTGGCTGTGCCTGTTTTAGTCTCAAAAGCTCTAGAGCTATTTTTGCAAGATCTTTGTGACCATACTTATGACATAACTCTTCTTAGAGGAGCGAAGACTATGAGTGCATTGCATCTAAAGCATTGTGTACAAAGGTACAATGTTTTTGATTTTCTGAGAGATGTCGTGAGCAGGGTTCCTGACTACAGTCATGGGTACGGGCATGGCCATTCTGATTCTGGTGCTGATGATCGGGCTGTCTCAAAGAGAAGGAAAGCAGCTGGTTATAATTACTGTGTCAGTGATGAGGAATCTAAGAGGAGCAAGATGCATGGGTTGAACCACGCAGGCAGTACTGGAAGGGGAAGAGGTAGAGGTAGAGGTAGAGGTAGAGGAAGAGGCCGAGGTCGAGGCGCTCGAACTGTTGAAAGAGATAACTGTCTTCAGGAGGTTGAACCTGAGCCTTGCAGCCTTGTTCAACACAGCAGCAAACATAATCCAAACACAAGTAGGATAGAAGAAAATGGTTCGGAGTCATCAAAGGAGAATACTGCAGTTCCTGGTGAAGGATCTCAGTCTCTCACTAAGATTGGTTTGAATTCCAACGGAAATGAAAATGTCGATAAAAATGCTAGCACAAAAGCTGATGCCTCAGGGCCTGAACCTGCAACAGAGACCCAGCTTGAAGAAATCCTGGGCTGGTCGATGGCGATTGATTCTATGCAGCTTGGTAGACAATTAGAAGAGGCGGACGATGAAGATTATGATGAGGAAGGGTAA 843 0.4496 MRKRLDTRFPAARIKKIMQADEDIGKIALAVPVLVSKALELFLQDLCDHTYDITLLRGAKTMSALHLKHCVQRYNVFDFLRDVVSRVPDYSHGYGHGHSDSGADDRAVSKRRKAAGYNYCVSDEESKRSKMHGLNHAGSTGRGRGRGRGRGRGRGRGRGARTVERDNCLQEVEPEPCSLVQHSSKHNPNTSRIEENGSESSKENTAVPGEGSQSLTKIGLNSNGNENVDKNASTKADASGPEPATETQLEEILGWSMAIDSMQLGRQLEEADDEDYDEEG 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0329 280 MobiDBLite consensus disorder prediction 157 171 - -
Lele31g0329 280 SUPERFAMILY Histone-fold 3 89 IPR009072 GO:0046982
Lele31g0329 280 MobiDBLite consensus disorder prediction 127 247 - -
Lele31g0329 280 MobiDBLite consensus disorder prediction 180 241 - -
Lele31g0329 280 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Lele31g0329 280 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 122 - -
Lele31g0329 280 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Lele31g0329 280 FunFam dr1-associated corepressor homolog 1 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0329 Lele-ChrLele31 6354160 6359278 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0329 1 140 CCAAT-HAP5 Transcription Factor Family AT3G12480 71.429 7.68e-69 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Lele31g0329 CBFD_NFYB_HMF 1.1e-17 CL0012