Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0324 ATGAGCTTGTTAGGCCTGCGAGACCTACTTCTCATAGCTCCAAATCCTTCTTCTCTTCACCAGCAGCAGCAACAACCCCAACAACAGGACCGTTCGAACCTTCATCATCATCTTCCTTCTTCTGCTTCTCTCAGCGTCGGTCTCGGCATTTTCCCTCTCCTCACCGCCACTCCTTGCGTCCCCAATGACCTCCCTCACGATTCCGCCGATCACAATCATCATCATCAGAATACTGCCAACAATTCCAATTTCTGGAACCTCAAAATGTGTCCGGCGGAAGTTGCGAATTCTGCCAAGAAAGGAGTGATCGATGTGGAAGGTGAAGAGAATGGGAATTTTGGGGGTGATTTTAGGATGACCGTTCTTGCTGCCGCCGGAGCTGCTGCTGCTGGTGCTTCTGGGTCGCCTCCCGGTTCTAAGAGGCCTAGAAAGTTCAGGTCGTCACAGAATGCTGCCACCACTTCTCATAGTTCTGCCTCCAACGCTACTACGCCAAGAAGCTTAGATACGAGCTCTTGTCGCCAAGATGCTAGCTTCAAACAGTCTTTACCAGGTCATGTTCGTGTGCCTGCGTTATTTAGGTGCCATAGAGTTTCGGCTATTGGTAATGGCGAAGATGAGTTTGCATACATGGCCACAGTTCATATCAGTGGCCATGTTTTCAAGGGGTTTCTTTATGATCAAGGTGCTGATGGTAAAAGCACAATCCCATGTGTTTCGGAACTTCAACTGGGAAATTATAGCAGTGAAAATAATAGGGAATGTTCTTCTCCAATTGGTGTCCTAACCAATAATGCATACCCTGCTTCTGGCTGTTGA 819 0.4823 MSLLGLRDLLLIAPNPSSLHQQQQQPQQQDRSNLHHHLPSSASLSVGLGIFPLLTATPCVPNDLPHDSADHNHHHQNTANNSNFWNLKMCPAEVANSAKKGVIDVEGEENGNFGGDFRMTVLAAAGAAAAGASGSPPGSKRPRKFRSSQNAATTSHSSASNATTPRSLDTSSCRQDASFKQSLPGHVRVPALFRCHRVSAIGNGEDEFAYMATVHISGHVFKGFLYDQGADGKSTIPCVSELQLGNYSSENNRECSSPIGVLTNNAYPASGC 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0324 272 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 183 229 IPR006511 -
Lele31g0324 272 MobiDBLite consensus disorder prediction 142 175 - -
Lele31g0324 272 MobiDBLite consensus disorder prediction 129 175 - -
Lele31g0324 272 Pfam Domain of unknown function (DUF702) 136 231 - -
Lele31g0324 272 MobiDBLite consensus disorder prediction 17 39 - -
Lele31g0324 272 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 132 256 IPR007818 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0324 Lele-ChrLele31 4380349 4381734 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0324 140 259 C2H2 Transcription Factor Family AT5G12330 48.387 7.65e-27 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Lele31g0324 DUF702 7.6e-24 No_clan