Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0302 ATGAAAGTCCCCTGCTGTTCGGTTTGCCAAACGCGGTATAACGAGGAAGAGCGAGTCCCACTTCTGCTCCAATGTGGGCATGGGTTTTGCAGAGAGTGTCTCTCAAGAATGTTCTCGGCTTCTTCAGATACGACGCTAGCGTGTCCGAGGTGTCGCCATGTGTCCATCGTCGGGAACTCTGTGCAGGCTCTGCGCAAGAACTACGCCGTGCTGGCTCTTATTCACTCGGCTTCGAATGCTTCGGGTTCGAATTTCGATTGTGACTTCACAGATGATGATGAAGAAGGGGGTGATGGTGGTGAAGAAGATGGAGACAATGATGACGACTCGGTCATGCGCCGTCGGTGTAGCCGCGGTTCCCAAACATCTAGCTCTGGCGGCTGTGGACCGGTTATAGAGGTTGGAGTGCACCAAGAGTTGAAATTTCTGCGTCGGCTAGGAGAGGGGAGGAGAGCTGGCATGGAAATGTGGACAGCAGTGATTGTTGGTGGTGGTGGAAATGGACGGTGCCGACATCAAGTGGCTGTGAAGAAGGTTACGATAATGGAGGAGATGGATTTGGATTGGATGCAGGGGCAGCTTGAGAATCTGCGTCGGGCATCGATGTGGTGTAGGAATGTATGTACATTTCATGGGGCAATGAGGATGGAGGATAGTTTGTGTCTTGTGATGGACCGGTGTTATGGATCAGTTCAGTCGGAGATGCAGCGCAACGAGGGCAGACTTACTTTGGATCAAGTCTTAAGATATGGGGCGGACATTGCTAGAGGGGTGGCTGAGCTTCATGCTGCTGGTATTGTTTGCATGAATCTCAAACCATCCAATCTTCTTCTTGATGCAAATGGTCGAGCAGTGATTTCAGATTATGGACTTGCTACAATTTTGAAGAAGCCTTCTTGTCGGAAGGCCCGACCAGAATGTGATAACTCCTCAAAGATCCATTCATGCATGGAGTGTATAATGCTCAGCCCACATTACACAGCTCCTGAGGCTTGGGAACCTGTGAAGAAGTCATTAAATTTGTTCTGGGATGATGCAATAGGTATATCTGCAGAGTCGGATGCCTGGAGTTTTGGTTGTACACTGGTGGAAATGTGCACGGGTTCTGTTCCTTGGTCTGGTTTAAGTGCAGAAGAAATCTATAGAGCAGTTGTCAAGGGAAAGAAACTACCACCACAGTACGCTAGTGTGGTTGGTGGTGGAATACCAAGGGAGTCGTGGAAGATGATTGGAGAGTGCTTGCAGTTCAAACCAGCCAAAAGGCCTAGTTTTAATGCAATGTTAGCAATATTTCTTCGTCATTTGCAGGAAATACCACGCAGCCCTCCTGCAAGCCCTGATAATGACTTTGTTCAATCATCTGTGTCAAATGCCGTAGAGCCTTCCCCACTACCTGAGCCAGAAGTTCCACGAGAAAACCCAAACCATCTTCATCAACTTGTGTCTGAAGGGGATGTTAGAGGTGTTAGAGATCTTCTTGCAAAGGCTGCATCAGAAAATGGTAGCAACTACCTATCTTCTTTATTGGATGCTCAAAATGCTGATGGGCAAACTGCTCTTCATCTAGCTTGTAGACGGGGTAGTGCAGAACTTGTTGAAGCTATTTTGGAGTACAATGAGGCAAATGTAGATGTCTTGGACAAAGATGGAGATCCTCCTCTTGTTTTTGCATTAGCAGCTGGATCTCCAGAATGTGTCCATAGTCTTATAAAAAGAAATGCTAATGTAAGGTCTCGGTTGAGAGATGGCTTTGGCCCTTCTGTTGCCCATGTTTGCGCTTATCATGGACAGCCAGATTGCATGCGAGAATTACTGTTGGCTGGAGCGGATCCTAATGCGGTGGATGATGAAGGAGAAACTGTACTGCATAGAGCAGTTGCCAAGAAGTACACAGACTGTGCTATTGTGATATTGGAAAATGGAGGCTGCAGATCAATGGGCATCTTAAATTCGAAGAATCTGACACCACTGCACTTGTCTGTGGCAACATGGAATGTGGCTGTTGTAAAAAGATGGGTGGAAGTTGCAACTTCTGATGAGATTGCTGAGGCAATTGACATTCCAAACCCTATTGGCACTGCACTGTGCATGGCAGCTGCTTCTAAGAAAGACCATGAAATTGTGATGTTCCTTGATGCTAAAGAAAGTAAAGGGGGTCAAGACGTTATAACTGCATCTGTTTTAACGGGCTAA 2193 0.4706 MKVPCCSVCQTRYNEEERVPLLLQCGHGFCRECLSRMFSASSDTTLACPRCRHVSIVGNSVQALRKNYAVLALIHSASNASGSNFDCDFTDDDEEGGDGGEEDGDNDDDSVMRRRCSRGSQTSSSGGCGPVIEVGVHQELKFLRRLGEGRRAGMEMWTAVIVGGGGNGRCRHQVAVKKVTIMEEMDLDWMQGQLENLRRASMWCRNVCTFHGAMRMEDSLCLVMDRCYGSVQSEMQRNEGRLTLDQVLRYGADIARGVAELHAAGIVCMNLKPSNLLLDANGRAVISDYGLATILKKPSCRKARPECDNSSKIHSCMECIMLSPHYTAPEAWEPVKKSLNLFWDDAIGISAESDAWSFGCTLVEMCTGSVPWSGLSAEEIYRAVVKGKKLPPQYASVVGGGIPRESWKMIGECLQFKPAKRPSFNAMLAIFLRHLQEIPRSPPASPDNDFVQSSVSNAVEPSPLPEPEVPRENPNHLHQLVSEGDVRGVRDLLAKAASENGSNYLSSLLDAQNADGQTALHLACRRGSAELVEAILEYNEANVDVLDKDGDPPLVFALAAGSPECVHSLIKRNANVRSRLRDGFGPSVAHVCAYHGQPDCMRELLLAGADPNAVDDEGETVLHRAVAKKYTDCAIVILENGGCRSMGILNSKNLTPLHLSVATWNVAVVKRWVEVATSDEIAEAIDIPNPIGTALCMAAASKKDHEIVMFLDAKESKGGQDVITASVLTG 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0302 730 ProSiteProfiles Ankyrin repeat profile. 584 616 IPR002110 GO:0005515
Lele31g0302 730 MobiDBLite consensus disorder prediction 442 473 - -
Lele31g0302 730 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 1 707 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
Lele31g0302 730 MobiDBLite consensus disorder prediction 446 460 - -
Lele31g0302 730 Pfam Protein kinase domain 171 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0302 730 Gene3D Transferase(Phosphotransferase) domain 1 154 445 - -
Lele31g0302 730 Pfam Ankyrin repeats (many copies) 587 636 IPR002110 GO:0005515
Lele31g0302 730 SUPERFAMILY Protein kinase-like (PK-like) 164 469 IPR011009 -
Lele31g0302 730 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 85 IPR013083 -
Lele31g0302 730 MobiDBLite consensus disorder prediction 90 106 - -
Lele31g0302 730 Gene3D - 470 583 IPR036770 -
Lele31g0302 730 Pfam Ankyrin repeats (3 copies) 495 577 IPR002110 GO:0005515
Lele31g0302 730 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
Lele31g0302 730 SUPERFAMILY Ankyrin repeat 476 711 IPR036770 -
Lele31g0302 730 ProSiteProfiles Zinc finger RING-type profile. 6 52 IPR001841 -
Lele31g0302 730 ProSiteProfiles Ankyrin repeat profile. 515 548 IPR002110 GO:0005515
Lele31g0302 730 FunFam E3 ubiquitin-protein ligase KEG 455 685 - -
Lele31g0302 730 MobiDBLite consensus disorder prediction 90 130 - -
Lele31g0302 730 SMART ANK_2a 584 613 IPR002110 GO:0005515
Lele31g0302 730 SMART ANK_2a 652 683 IPR002110 GO:0005515
Lele31g0302 730 SMART ANK_2a 549 578 IPR002110 GO:0005515
Lele31g0302 730 SMART ANK_2a 515 545 IPR002110 GO:0005515
Lele31g0302 730 SMART ANK_2a 617 648 IPR002110 GO:0005515
Lele31g0302 730 SMART ring_2 6 51 IPR001841 -
Lele31g0302 730 Gene3D - 584 726 IPR036770 -
Lele31g0302 730 SUPERFAMILY RING/U-box 5 57 - -
Lele31g0302 730 FunFam E3 ubiquitin-protein ligase KEG 228 445 - -
Lele31g0302 730 Pfam RING-type zinc-finger 6 49 IPR027370 -
Lele31g0302 730 ProSiteProfiles Ankyrin repeat region circular profile. 515 539 - -
Lele31g0302 730 ProSiteProfiles Protein kinase domain profile. 140 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0302 Lele-ChrLele31 3506573 3511147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0302 145 440 MAP Kinase Kinase Kinase AT1G63700 25.407 5.10e-18 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Lele31g0302 Pkinase 2.6e-30 CL0016