Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0286 ATGCCAGGCTTCGATTCTCAGTTACCAGTTCCAAATGCACGCCATACAGAAGGAAGCACGGTTGAATCTTTTCAAGTTTCTGACTTTGGAGCCTTTGATCAATCAGTGAGATATCGTTTAGATGGTGCTGTTAACTTGACTGGAGACCAAGTTTATAACTCACTCAAAGCAATTAGCCAAACAAATTCTCTTGGTCCCATTCCTGTTGGTAGTTTTGATAAGTTTCCAACTTCACTTGAAATAAACGAATTCACTAAGCAATCAGAGTCCCAAGTTTTGCAGTCGCAAAGGGTCCAACTGCCAAATTTGGTAACCATATCAGGTGGTAATACAGAAAACCAGGTGGAGTCTGCCATGGCTGATGTCAGTCCCAGGACAGATATTTCTACAGATGCTGATACTGATGAAAAGAATGGGCGGTTTGATAGAAGTCTGTCCATTGCTGCTGGTGCTTCTGATTCCAGTGACAGATCAAAGGATAAATTAGATCAGAAGACTCTCCGCAGGCTTGCTCAGAATCGGGAGGCTGCAAGAAAAAGCCGGTTGAGAAAGAAAGCTTATGTCCAGCAGTTAGAAAGTAGTCGGTTGAAGTTGACCCAACTAGAGCAAGAGCTTCAGCGAGCTAGACAGCAGGGAATCTTCATATCAAGCTCAGGTGACCAGGCACATTCAATGGGTGGAAATGGGGCGATGGCATTTGATGTAGAATATTCTAGGTGGCTAGAAGAGCAGAATCGACAAATGAATGAGCTAAGAGCAGCTGTAAACTCCCATGCAAGTGATACAGAACTTCGCATGATTATTGATGGTATATTGGCACATTATGATGAGATTTTTAAGCTGAAGAGCTCTGCTGCTAAGAATGATGTTTTCCATTTGTTGTCTGGCATGTGGAAAACACCTGCTGAGAGATGTTTTCTATGGCTTGGTGGTTTTCGGTCATCGGAACTCCTCAAGAATTAG 963 0.4309 MPGFDSQLPVPNARHTEGSTVESFQVSDFGAFDQSVRYRLDGAVNLTGDQVYNSLKAISQTNSLGPIPVGSFDKFPTSLEINEFTKQSESQVLQSQRVQLPNLVTISGGNTENQVESAMADVSPRTDISTDADTDEKNGRFDRSLSIAAGASDSSDRSKDKLDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQAHSMGGNGAMAFDVEYSRWLEEQNRQMNELRAAVNSHASDTELRMIIDGILAHYDEIFKLKSSAAKNDVFHLLSGMWKTPAERCFLWLGGFRSSELLKN 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0286 320 ProSiteProfiles DOG1 domain profile. 230 320 IPR025422 GO:0006351|GO:0043565
Lele31g0286 320 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 168 183 IPR004827 GO:0003700|GO:0006355
Lele31g0286 320 PANTHER TRANSCRIPTION FACTOR TGA9 94 319 - -
Lele31g0286 320 SMART brlzneu 161 224 IPR004827 GO:0003700|GO:0006355
Lele31g0286 320 MobiDBLite consensus disorder prediction 128 142 - -
Lele31g0286 320 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 163 207 IPR004827 GO:0003700|GO:0006355
Lele31g0286 320 MobiDBLite consensus disorder prediction 107 167 - -
Lele31g0286 320 Gene3D - 164 216 - -
Lele31g0286 320 CDD bZIP_HBP1b-like 165 217 - -
Lele31g0286 320 SUPERFAMILY Leucine zipper domain 165 208 IPR046347 GO:0003700|GO:0006355
Lele31g0286 320 Coils Coil 184 211 - -
Lele31g0286 320 FunFam BZIP family transcription factor 164 213 - -
Lele31g0286 320 Coils Coil 241 261 - -
Lele31g0286 320 Pfam bZIP transcription factor 165 205 IPR004827 GO:0003700|GO:0006355
Lele31g0286 320 MobiDBLite consensus disorder prediction 107 124 - -
Lele31g0286 320 Pfam Seed dormancy control 247 319 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0286 Lele-ChrLele31 3066619 3072080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0286 119 319 bZIP Transcription Factor Family AT3G12250 82.090 5.02e-121 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele31g0286 DOG1 7.1e-32 No_clan