Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0267 ATGTTAACGCCATTGTTGATGGAGTCCCTTGTTCTTAATCTCCATGAGATCTCAGCTGTCAAATTTGGCAATTTCAAGCTTAAATCTGGCATTTCCTCACCGATATACTTAGACCTCCGGCTCATTATATCATACCCTTCCCTTCTCCGCCAAGTCTCTCAAACATTGATCTCCTCTGTTTCTTCCTCTTCCTTTGACCTTGTATGTGGTGTCCCCTACACTGCTCTACCCATTGCTACTTGTGTCTCTGTGACTCAGAATATTCCCATGGTCATGCGCCGCAAGGAAATCAAAGACTATGGCACTGCTAAAGCCATTGAAGGTGATTTCAAGGCTGGCCAAAGTTGCTTAATCATTGAGGATTTAGTTACCAGTGGCACCTCAGTGTTAGAAACTGCTGTGCCCCTGCGTGCTGCAGGGTTAAAGGTTAGTGATGCTGTTGTTTTGATTGATAGAGAGCAAGGTGGGAGAGAGAATTTGGAGGAGAATGGGATCAGGCTACATTCAATTGTTAAATTGACTGAAATGGTAAACATTTTGAGGGAAAAGGGAAAGCTTGAGAAGGATATGGTAGAGGTTGTTATGAAATTCTTGGAGGAGAATCAGTGGGTTGCTGCTTTGGCAAAATTAGGGAAGCCTAAGAGGGTCAAGGCTTTGTCATTTGGGGAAAGGGCAAAGTTTTCTAAGAATCCAACTGGGAAGAGGTTGTTTGAGATAATGGCCGAGAAAGAGAGTAATCTTTGTTTGGCTGCAGATGTTGGAACTGCAGCTGAATTGCTTGAAATTGCAGAAAAGGTTGGGCCTGAGATATGCTTGCTGAAAACTCATGTGGATATTTTGCCAGATTTTACTCCTGATTTTGGTTCTAAGCTTCGCAAGATTGCAGAGAAACATAATTTCTTAGTCTTTGAGGATCGTAAATTTGCCGACATCGGTAGCACGGTTACTAGGCAATATGAAGGGGGGATTTATCACATACTGGAGTGGGCTGATATAGTAAATGCTCACATTATTTCTGGTCCTGGAATTGTGGATGGATTGAAATTGAAGGGTTTGCCTCGGGGTAGGGGTTTGTTGTTGCTTGCCGAAATGAGTTCAGCCGGTAACCTTGCCACGGGATATTATACAGCTGCAGCAGTGAGAGTTGCCGAGGATCATTCAGATTTTGTGATTGGCTTTATTTCAGTCAATCCAGCATCATGGCCAGGGCAACCGGTAAATCCGTCTTTCATTCATGCAACTCCTGGAGTTCGAATGGTGACTGGTGGTGATGCATTAGGGCAGCAATATAACACTCCATATTCTGTAATATATAACAAGGGAAGTGACATAATTATTGTGGGTCGTGGCATCATCAAAGCTGAAAACCCGGCAAAGGCAGCTCATGAATATCGACTTGCAGGATGGAAAGCTTATTTGGCCAATTTCACTTGA 1434 0.4344 MLTPLLMESLVLNLHEISAVKFGNFKLKSGISSPIYLDLRLIISYPSLLRQVSQTLISSVSSSSFDLVCGVPYTALPIATCVSVTQNIPMVMRRKEIKDYGTAKAIEGDFKAGQSCLIIEDLVTSGTSVLETAVPLRAAGLKVSDAVVLIDREQGGRENLEENGIRLHSIVKLTEMVNILREKGKLEKDMVEVVMKFLEENQWVAALAKLGKPKRVKALSFGERAKFSKNPTGKRLFEIMAEKESNLCLAADVGTAAELLEIAEKVGPEICLLKTHVDILPDFTPDFGSKLRKIAEKHNFLVFEDRKFADIGSTVTRQYEGGIYHILEWADIVNAHIISGPGIVDGLKLKGLPRGRGLLLLAEMSSAGNLATGYYTAAAVRVAEDHSDFVIGFISVNPASWPGQPVNPSFIHATPGVRMVTGGDALGQQYNTPYSVIYNKGSDIIIVGRGIIKAENPAKAAHEYRLAGWKAYLANFT 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0267 477 CDD PRTases_typeI 65 172 IPR000836 -
Lele31g0267 477 SUPERFAMILY PRTase-like 7 197 IPR029057 -
Lele31g0267 477 Pfam Orotidine 5'-phosphate decarboxylase / HUMPS family 245 464 IPR001754 GO:0004590|GO:0006207
Lele31g0267 477 TIGRFAM pyrF: orotidine 5'-phosphate decarboxylase 247 465 IPR014732 GO:0004590|GO:0044205
Lele31g0267 477 SMART OMPdecase_2 246 464 IPR001754 GO:0004590|GO:0006207
Lele31g0267 477 PANTHER OROTATE PHOSPHORIBOSYLTRANSFERASE 6 475 - -
Lele31g0267 477 ProSitePatterns Orotidine 5'-phosphate decarboxylase active site. 302 315 IPR018089 GO:0004590|GO:0006207
Lele31g0267 477 TIGRFAM pyrE: orotate phosphoribosyltransferase 14 175 IPR004467 GO:0004588
Lele31g0267 477 Gene3D Aldolase class I 216 476 IPR013785 -
Lele31g0267 477 Hamap Orotate phosphoribosyltransferase [pyrE]. 1 233 IPR023031 GO:0004588|GO:0006221
Lele31g0267 477 SUPERFAMILY Ribulose-phoshate binding barrel 219 473 IPR011060 -
Lele31g0267 477 Pfam Phosphoribosyl transferase domain 60 158 IPR000836 -
Lele31g0267 477 FunFam Uridine monophosphate synthetase 216 477 - -
Lele31g0267 477 FunFam Uridine monophosphate synthetase 4 207 - -
Lele31g0267 477 Gene3D - 6 210 IPR029057 -
Lele31g0267 477 CDD OMP_decarboxylase_like 247 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0267 Lele-ChrLele31 2827424 2831376 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g1309 29 19693263 19696782 Lele31g0267 31 2827424 2831376 hybridization