Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele31g0245 | ATGGCTACGTTAGATTCCAAAGAGAAACCAAAACCTGTGAAGGAAGAAGAAGAAGAAGAAGACGACGACTTTGATTCGACTGTGCTTTCAGCGCTTCTTCTTCGCAGCACCCAGATCTTCTCTGCAGCTCTGAACGCAGCCATTGAACTCAACTTGTTTGACATCATCGCTGAGGGAGGAGGAAGACACGTATCAGCTTCTGAAGTGGCTTCTCGGCTTCCCAGTTCATCTCAGCACAGAGACTTAGCTTTCAGAATCGATCGTCTATTGAGGCTTCTCGCGAGTCACTCACTTCTGAGTTGCAGGGTTCGTGAGAAGGAAGAAGAAGAAGAAGATGCCACTGATGAGAGATTCTATGCGATTTCTTCCATTGGCAGGCACTTTGTGAGTGGTTCTTTGGGATTCGTACCAATCTTCTCTCATCCTGGACTCATGCAAGCCTGGCCCAACTTTAAGGATGCAATAATAGACGAAGACAGTGACTTGTTCAAGAAAACTCATGGAATGCCAATGTACCAATACGCAAAGACCGATCCAACATGGAATGAAACTTTCAACAAAGCAATGGCCAACTTTTCCAATCTGGAGATGAGAAGGATCCTTGAAATATACAAAGGATTTGAGGGAATATCAACACTTGTTGATGTTGGAGGAGGCACTGGTCAAATCCTTAAAATGATTGTCTTAAAATACCCTTCAATTAAGGGCATTAATTTTGATTTGCCTCAAGTAATTCAAAATGCACCATCCCTTCCAGGGATTGAGCATGTTGGAGGAGATATGTTTGAAAGTGTTCCAAAAGGTGATGCCATCATATTAAAGGCAGTATGCCACAATTGGTCAGATGAAAAGAGCATAAAAGTGTTGAAGAAATGTCATGAATCATTACCAGAGAAAGGGAAGGTGATAGTGGTGGAGTTCATAATGCCTGTAGCAAATAAGGCAACAGAAGAAGCCAAGTTTTTGTCAATCTTGGACAATCTCATGTTCCTTCATGATGGAAGAGAAAGAACTAAGAGAGAATTTGAATCTCTTTGCAAAAATTCTGGCTTTTCAAGCTTCAAAGTTGCTTGTCGAGCCTTGTCTGCTTTAGGAGTCATGGAATTTTGCAAATAA | 1116 | 0.4185 | MATLDSKEKPKPVKEEEEEEDDDFDSTVLSALLLRSTQIFSAALNAAIELNLFDIIAEGGGRHVSASEVASRLPSSSQHRDLAFRIDRLLRLLASHSLLSCRVREKEEEEEDATDERFYAISSIGRHFVSGSLGFVPIFSHPGLMQAWPNFKDAIIDEDSDLFKKTHGMPMYQYAKTDPTWNETFNKAMANFSNLEMRRILEIYKGFEGISTLVDVGGGTGQILKMIVLKYPSIKGINFDLPQVIQNAPSLPGIEHVGGDMFESVPKGDAIILKAVCHNWSDEKSIKVLKKCHESLPEKGKVIVVEFIMPVANKATEEAKFLSILDNLMFLHDGRERTKREFESLCKNSGFSSFKVACRALSALGVMEFCK | 371 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele31g0245 | 371 | Pfam | O-methyltransferase domain | 148 | 352 | IPR001077 | GO:0008171 | |
| Lele31g0245 | 371 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 32 | 371 | IPR016461 | GO:0008168 | |
| Lele31g0245 | 371 | FunFam | Caffeic acid 3-O-methyltransferase | 8 | 128 | - | - | |
| Lele31g0245 | 371 | Pfam | Dimerisation domain | 43 | 94 | IPR012967 | GO:0046983 | |
| Lele31g0245 | 371 | PIRSF | O-mtase | 8 | 371 | IPR016461 | GO:0008168 | |
| Lele31g0245 | 371 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
| Lele31g0245 | 371 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 133 | 358 | IPR029063 | - | |
| Lele31g0245 | 371 | PANTHER | O-METHYLTRANSFERASE | 34 | 354 | IPR016461 | GO:0008168 | |
| Lele31g0245 | 371 | CDD | AdoMet_MTases | 212 | 309 | - | - | |
| Lele31g0245 | 371 | SUPERFAMILY | "Winged helix" DNA-binding domain | 24 | 131 | IPR036390 | - | |
| Lele31g0245 | 371 | FunFam | Caffeic acid O-methyltransferase | 128 | 371 | - | - | |
| Lele31g0245 | 371 | Gene3D | Vaccinia Virus protein VP39 | 132 | 371 | IPR029063 | - | |
| Lele31g0245 | 371 | Gene3D | - | 10 | 128 | IPR036388 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele31g0245 | Lele-ChrLele31 | 2510664 | 2522294 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele31g0245 | 25 | 361 | Monolignol Biosynthesis Gene Families | AT5G54160 | 45.930 | 2.57e-102 | 305 |