Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele31g0244 | ATGGCTTTGGAATCCAGAGAGAATAATCATCATAAGGTTGAAGATGATGATTCATATTGTCTTTCTGCTATGCGTCTGTGTTGCAGTCAGATCTATTCTGCAGTTTTAAACGCAGCTCTTGAGCTCAACTTGTTTGAGATCATAGCTAAGGAAGGAGGAAGACGCGTGTCGGCCTCTGAAGTAGCTTCAAAGCTTCCAACTTCATCTCAACACAAAGATTTGGCTTTCAGAATCGATCGTCTCTTGAGGCTTCTTTCTACTCACTCTCTTCTGAATTGTTCATCTCGTGAGAAAGAAGATGGTAGCTCTGAAAGAGTCTATGCAATTTCTCCTGTTGGGAAGTACTTTGTTGGTGGAGACGATAACGGTGGATTCTTGGCTCTCTTCTCATCATTCATATGTCATAGGGCACTAGTGGATGTTTGGCTGAGCTTTAAGGATGCGGTCATAGACGAAGACCATGACTTGTTCAAGAAAGTTCATGGGATGGCAATGTATCAATACGCTGAGAAAGATCCAAAGTGGAACAGTATTTTCAACAAAGCAATGGCCAACATTTGTAATATTGAGATGAATAGAATATTGGAAATATATAAAGGATTTGAGGGAATGTCAACACTTGTTGATGTTGGTGGTGGTACTGGCCAAAACCTCAAAATGATCATCTCCAAATATCCTTCAATTAAAGCCATTAATTTTGATTTGCCCCAGGTCATTCAAAATGCTCAACCTCATCCAGGGATTGAGCATGTTGGAGGAGATATGTTTGAAAGTGTTCCAAAAGGTGATGCCATAATACTAAAGGCTGTATGTCACAATTGGTCAGATGAAAATAGCATTAAAGTATTGAGGAAATGCAATGAAGCATTAGCAGGGAAAGGGAAGGTGATAGTGGTGGAGTTCATAATGCCTGAAGCAATTGAGGCAACAGAAGAAGCCAAGTTTGTAGCGAGCATGGACAATCTCATGTTTCTTCATGATGGAAGAGAAAGAACTGAGAAAGAATTTGAATCTCTTTGCAAACGTTCTGGTTTTTCTGCTTTCAAAGTTGCTTGTCGTGCCTTCTCTGCTCTTGGAGTCATGGAATTCTATAAATAA | 1098 | 0.3998 | MALESRENNHHKVEDDDSYCLSAMRLCCSQIYSAVLNAALELNLFEIIAKEGGRRVSASEVASKLPTSSQHKDLAFRIDRLLRLLSTHSLLNCSSREKEDGSSERVYAISPVGKYFVGGDDNGGFLALFSSFICHRALVDVWLSFKDAVIDEDHDLFKKVHGMAMYQYAEKDPKWNSIFNKAMANICNIEMNRILEIYKGFEGMSTLVDVGGGTGQNLKMIISKYPSIKAINFDLPQVIQNAQPHPGIEHVGGDMFESVPKGDAIILKAVCHNWSDENSIKVLRKCNEALAGKGKVIVVEFIMPEAIEATEEAKFVASMDNLMFLHDGRERTEKEFESLCKRSGFSAFKVACRAFSALGVMEFYK | 365 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele31g0244 | 365 | PANTHER | O-METHYLTRANSFERASE | 29 | 355 | IPR016461 | GO:0008168 | |
| Lele31g0244 | 365 | Pfam | Dimerisation domain | 35 | 86 | IPR012967 | GO:0046983 | |
| Lele31g0244 | 365 | Pfam | O-methyltransferase domain | 142 | 346 | IPR001077 | GO:0008171 | |
| Lele31g0244 | 365 | Gene3D | - | 158 | 194 | IPR036388 | - | |
| Lele31g0244 | 365 | CDD | AdoMet_MTases | 206 | 303 | - | - | |
| Lele31g0244 | 365 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 24 | 365 | IPR016461 | GO:0008168 | |
| Lele31g0244 | 365 | FunFam | Caffeic acid O-methyltransferase | 120 | 365 | - | - | |
| Lele31g0244 | 365 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 129 | 361 | IPR029063 | - | |
| Lele31g0244 | 365 | FunFam | Caffeic acid 3-O-methyltransferase | 2 | 116 | - | - | |
| Lele31g0244 | 365 | SUPERFAMILY | "Winged helix" DNA-binding domain | 15 | 121 | IPR036390 | - | |
| Lele31g0244 | 365 | PIRSF | O-mtase | 1 | 365 | IPR016461 | GO:0008168 | |
| Lele31g0244 | 365 | Gene3D | Vaccinia Virus protein VP39 | 176 | 354 | IPR029063 | - | |
| Lele31g0244 | 365 | Gene3D | - | 30 | 153 | IPR036388 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele31g0244 | Lele-ChrLele31 | 2498584 | 2502248 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele31g0244 | 16 | 365 | Monolignol Biosynthesis Gene Families | AT5G54160 | 47.443 | 2.78e-112 | 330 |