Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele31g0240 | ATGGCTTTAGATTCTAAACAGAAACGTCCTTACGAAGTAGAAGAAGAAGAAGAAGAAGATTCATATTGTCTTTCTGCCATGCTTCTGTGTTTTAGTCAGATCTACAGTGCAGCTCTTAAAGCTTCGCTTGACCTCAACTTATTTGAGATCATAGCTAAGGAAGGAGGAAGACACGTGTCAGCCTCTGAAATAGCTTCAAAGCTTCCAACTTCATCTCAACACAAAGATTTAGCTTTCAGAATCGATCGTCTCTTGAGGCTTCTTGCAAGTCACTCTCTTTTGAACTGTTCATCTCGTGAGAAAGAAGATGGTGATGGCACTGAGATACTCTTTGGGATTTCTCCTGTGGGAAAATACTTTCTTAGCGATAATGGTGGATTATGTGATCTTGCCTCGTTCAAGTGTCATCAAGCACTTGTTGATGTCTGGTTGAATTTTAAGGAAGCAATCATAGACGAAGACAGTGACTTGTTCAAGAAAATTCATGGAATGCCAATGTACCAATATGCAAAGACAGATCCAACGTTGAACAAAACATTCAACAAAGCAATGGCCAATGCTTGCAACATAGAGATGAGAAGGATTTTGGAAATATACAAAGGATTTGAGGGAATATCAACACTTGTTGATGTAGGTGGAGGCACTGGTCAAAACCTTAAAATGATTGTCGCTAAGTATCCTTCAATTAAGGCAGTTAATTTTGATTTGCCTCAAGTCATTCAAAATGCACCACCTCATCCAGGAATTGAGCACGTCGGAGGAGATATGTTTGAAAGTGTTCCAAAAGGTGATGCCATCATATTGAAGGCTGTATGTCACAATTGGTCGGATGAAAATAGCATAAAAGTATTGAAAAGATGCTATGAAGCATTGCCAGAGAAAGGGAAGGTGATAGTGGTGGAGCTGTTAATGCCTGAAATAATTGAAGCAACAAAAGAAGCCAAGTTAGTAACAAGCCTAGACAACACGATGTTTCTCCATGATGGAAGAGAAAGAACTGAGAAACAATTTGAATCTCTCTGTAGAAGTTCTGGTTTTTCTCATTTCAAACTTGCTTCTCGAGCTTTCTCTATTTTTGGAGTCATGGAATTCTACAAATGA | 1101 | 0.3887 | MALDSKQKRPYEVEEEEEEDSYCLSAMLLCFSQIYSAALKASLDLNLFEIIAKEGGRHVSASEIASKLPTSSQHKDLAFRIDRLLRLLASHSLLNCSSREKEDGDGTEILFGISPVGKYFLSDNGGLCDLASFKCHQALVDVWLNFKEAIIDEDSDLFKKIHGMPMYQYAKTDPTLNKTFNKAMANACNIEMRRILEIYKGFEGISTLVDVGGGTGQNLKMIVAKYPSIKAVNFDLPQVIQNAPPHPGIEHVGGDMFESVPKGDAIILKAVCHNWSDENSIKVLKRCYEALPEKGKVIVVELLMPEIIEATKEAKLVTSLDNTMFLHDGRERTEKQFESLCRSSGFSHFKLASRAFSIFGVMEFYK | 366 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele31g0240 | 366 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 132 | 363 | IPR029063 | - | |
| Lele31g0240 | 366 | CDD | AdoMet_MTases | 207 | 300 | - | - | |
| Lele31g0240 | 366 | PIRSF | O-mtase | 3 | 366 | IPR016461 | GO:0008168 | |
| Lele31g0240 | 366 | Gene3D | - | 159 | 195 | IPR036388 | - | |
| Lele31g0240 | 366 | Gene3D | - | 4 | 120 | IPR036388 | - | |
| Lele31g0240 | 366 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 27 | 366 | IPR016461 | GO:0008168 | |
| Lele31g0240 | 366 | FunFam | Caffeic acid 3-O-methyltransferase | 4 | 120 | - | - | |
| Lele31g0240 | 366 | SUPERFAMILY | "Winged helix" DNA-binding domain | 18 | 124 | IPR036390 | - | |
| Lele31g0240 | 366 | Pfam | Dimerisation domain | 38 | 89 | IPR012967 | GO:0046983 | |
| Lele31g0240 | 366 | Gene3D | Vaccinia Virus protein VP39 | 177 | 353 | IPR029063 | - | |
| Lele31g0240 | 366 | Pfam | O-methyltransferase domain | 143 | 347 | IPR001077 | GO:0008171 | |
| Lele31g0240 | 366 | PANTHER | O-METHYLTRANSFERASE | 31 | 356 | IPR016461 | GO:0008168 | |
| Lele31g0240 | 366 | FunFam | Caffeic acid O-methyltransferase | 122 | 366 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele31g0240 | Lele-ChrLele31 | 2462767 | 2468051 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele31g0240 | 7 | 358 | Monolignol Biosynthesis Gene Families | AT5G54160 | 48.315 | 1.03e-114 | 336 |