Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0236 ATGGCAAAGAGGAAGAGCTGGTTTAGTTTCGTGAAGAGGCTCTTTGTACGGGACACACAGTCCAAACCAGAGAAGAAAGAGAAAAGAAGGAAATGGATGTTTGGAATTGGAAGACTAAAGATAAAGAGATTACCTTCTATCACAGCTACACCTGCAACACTAAAAGAAACAAAACAAGAGGTTGAAAAGCTCAATAATAATGGCAGTCAATGTCACGAAGAAATTGAAGAATTACAAGTTGTTGTTAAGTCCACAGTTGAGGCTCCTCAACCCACATTACAATGCCAGAGGAACATTCAAGAATCTTCAGCCATCAAAATTCAGACTACATTTCGGGGTTACCTTGCAAGGAAGGCTCTAAGGGCATTGAAGGGAATAGTGAAGCTACAGGCCATCATTAGAGGCAGAGCAGTAAGACGGCAAACTATGAGCACTCTCAAGTGCTTGCAGTCACTTGTTGATATCCAGTCACAGGTCTGTGCCAAAAGACTCCAAATGGTTAAAGGGAGATGGGATTATGATGAGAACCAAGAGATTCCAAGTTTAAGGGACAAGATAATAAGGATGGATTCAATCAGTGAAAGGAGGTGGGATGACAGCATTTTGTTGAAGGAAGACACAGATGCTTCTTACATGAGCAAGAAAGAAGCAGAAGTTAAGAGAGAACGAATGAAAGAATACTCATTCAATCATAGAAGATCAGCAGAATCAGATAGAAAGAAGGTAAATGGGAGATGGAGGTATTGGATGGAGCAGTGGGTAGATACCCAACTTTCCAAAAGCAAAGAACTTGAAGATTTAGATTCACTTTTCAGTTCACATTACAGAGCAGCAGGGGAAGAAGATGGAGTAGTAGGAGGAAGAAGACAGCTTAATTTGAGAAATATTCAGAGTAAAAGACAAAATCAGATTATTGAAGGCCTATATTCTCCAAAACTTGCTCCAATAAGAAAACCTTCTCCTCACAGAAGGCAACATTCTCTGGGAAATGAAGAGCCTTCAAGCCCTTCTGTAATACTTCCAACATACATGTCAGCAACAGAATCAGCCAGAGCAAAAGCAAGATCTTCAAGCTCCCCAAAACTAAGAAATGTGAATGTGGTGGATTCAACAAAACTTGATGGTAACTCACCATGCAAAAAGAAGATATCTTTTGTATCTTCTTCCATCAACCAGCAGAGATCTCCAAGTTTAAAGGGAGTCTCAGGACCTATAAGATCAAGAAGGACAATGAAGGATCTCAGCATTAACTCAGATAGCTCATTTCTGTACGGTTACAATAGAGATTGGGAGGAACAAGGTATCTTCAAATGA 1314 0.4011 MAKRKSWFSFVKRLFVRDTQSKPEKKEKRRKWMFGIGRLKIKRLPSITATPATLKETKQEVEKLNNNGSQCHEEIEELQVVVKSTVEAPQPTLQCQRNIQESSAIKIQTTFRGYLARKALRALKGIVKLQAIIRGRAVRRQTMSTLKCLQSLVDIQSQVCAKRLQMVKGRWDYDENQEIPSLRDKIIRMDSISERRWDDSILLKEDTDASYMSKKEAEVKRERMKEYSFNHRRSAESDRKKVNGRWRYWMEQWVDTQLSKSKELEDLDSLFSSHYRAAGEEDGVVGGRRQLNLRNIQSKRQNQIIEGLYSPKLAPIRKPSPHRRQHSLGNEEPSSPSVILPTYMSATESARAKARSSSSPKLRNVNVVDSTKLDGNSPCKKKISFVSSSINQQRSPSLKGVSGPIRSRRTMKDLSINSDSSFLYGYNRDWEEQGIFK 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0236 437 ProSiteProfiles IQ motif profile. 124 151 IPR000048 GO:0005515
Lele31g0236 437 Gene3D - 98 151 - -
Lele31g0236 437 SMART iq_5 99 121 IPR000048 GO:0005515
Lele31g0236 437 Pfam Protein of unknown function (DUF4005) 320 394 IPR025064 -
Lele31g0236 437 Coils Coil 54 74 - -
Lele31g0236 437 ProSiteProfiles IQ motif profile. 100 128 IPR000048 GO:0005515
Lele31g0236 437 PANTHER IQ-DOMAIN 5-RELATED 1 386 - -
Lele31g0236 437 MobiDBLite consensus disorder prediction 312 338 - -
Lele31g0236 437 Pfam IQ calmodulin-binding motif 102 121 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0236 Lele-ChrLele31 2411198 2414471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0236 1 422 IQD Protein Family AT5G13460 44.708 1.91e-101 308
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g1341 29 20050101 20053509 Lele31g0236 31 2411198 2414471 hybridization
Lele30g0210 30 2486020 2489107 Lele31g0236 31 2411198 2414471 hybridization