Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0219 ATGTTCTTCATCAAACAAAGCCATCATCATCATCGTCTTCTTCATCTTCTTCTTCTTTCTCTTGTCATTATTCTTTCAGTGTCTTCTGTGGCCTCTGGTTTCCATGGAAACCAGCAAGCAAAAGCTCATGACAAGTTTCAGAAGCTAAAAAAGTACTTGAGATCAGGCCAAAATAATAAGAGGATCCTTTTTGAAGAAGCAGAAGAGATTATTGATATTGAAGCTCATGTTCATAAAGATCAACAAAAAGGGTTGAAGGAGAAAGACAGAATCGAGAAGCTTCCAGGTCAACCTCTGGTTAGGTTTTCTCAGTATGGAGGATATGTGACTGTGAATGAAGAAGCAGGACGTGCCTTTTATTATTATTTCACTGAAGCTTTTAAGAATAAGCAGAATTTGCCCCTCGTTCTCTGGCTCAATGGAGGGCCTGGATGTTCCTCTCTTGCCTATGGAGCCATGGAAGAACTTGGACCCTTCAGAGTCAACAGTGATGGCAAAACCCTTTTCAAGAACAGATATGCATGGAACTATGTTGCAAATATATTGTTCCTGGAGTCACCAGCTGGAGTGGGATTTTCATATTCAAACAGAACATCAGATTATGAAAACAGTGGAGACCAAAGAACAGCTACAGATAACTACATCTTCTTGTTGAATTGGTTAGAGAGGTTTCCTGAATATAAGAGCAGAGATTTCTACATTACTGGAGAAAGCTATGCTGGTCACTATGTTCCTCAACTTGCTCAAACTATTATCCAACATAACATTAAAGCCAACAAGACCATCATCAACCTCAAAGGAATCATGATAGGGAATGCAGCCATAAACGACGAGACAGATGAGAAGGGAATGTACGATTTCCTAGGAAGCCATGCGATAATGTCGGATTCAACAACTTCAATAATCGACAAGTTCTGTAATTTCTCTGCAAATGCGGAAGATCAAACAAAAGAGTGCAATGAAGCTTTGGAGGAAGTAGACAGAGATTCTTACTATGTTGATATCTACAACATCTATGCTCCTATCTGCAACAACCCTAATCTTACTGCCACCCCCAAGCCCACTTCTATTGTGTTGGACGAATGCAATGAATATTATATGATAGCATATTTGAATAGAGAGGAAGTTCAAGAGGCATTTCATGCGAATGTCACAAAACTCAAGTACGAGTGGACACCTTGCAGTGATGTGATACCAGAATGGCATGATAGCCCCTCATCCACTCTTCCGCTCTTACGTCAAATCATGAACCATGGAGTTAGGGTTTGGCTTTTCAGTGGAGACGTAGATGGAAGAGTGCCATTTACTGCAACACAATACGCTCTGAAATCAATGAATATGAAAGTCAAAACTCCATGGCATCCTTGGTACTTCAATGGACAGGTTGCAGGGTACACGCAAGTGTACAAGGGAGAGTTAACATTTGCAACAGTGAGGGACGCAGGGCATCAAGTGCCAAGCTACCAGGCAGCAAGGTCTCTTTCTATGTTCAAACACTTCTTGGATGGCTCTTCTCTTCCTGATACTACTAGATATTAA 1539 0.4094 MFFIKQSHHHHRLLHLLLLSLVIILSVSSVASGFHGNQQAKAHDKFQKLKKYLRSGQNNKRILFEEAEEIIDIEAHVHKDQQKGLKEKDRIEKLPGQPLVRFSQYGGYVTVNEEAGRAFYYYFTEAFKNKQNLPLVLWLNGGPGCSSLAYGAMEELGPFRVNSDGKTLFKNRYAWNYVANILFLESPAGVGFSYSNRTSDYENSGDQRTATDNYIFLLNWLERFPEYKSRDFYITGESYAGHYVPQLAQTIIQHNIKANKTIINLKGIMIGNAAINDETDEKGMYDFLGSHAIMSDSTTSIIDKFCNFSANAEDQTKECNEALEEVDRDSYYVDIYNIYAPICNNPNLTATPKPTSIVLDECNEYYMIAYLNREEVQEAFHANVTKLKYEWTPCSDVIPEWHDSPSSTLPLLRQIMNHGVRVWLFSGDVDGRVPFTATQYALKSMNMKVKTPWHPWYFNGQVAGYTQVYKGELTFATVRDAGHQVPSYQAARSLSMFKHFLDGSSLPDTTRY 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0219 512 PRINTS Carboxypeptidase C serine protease (S10) family signature 220 245 IPR001563 GO:0004185|GO:0006508
Lele31g0219 512 PRINTS Carboxypeptidase C serine protease (S10) family signature 171 183 IPR001563 GO:0004185|GO:0006508
Lele31g0219 512 PRINTS Carboxypeptidase C serine protease (S10) family signature 184 194 IPR001563 GO:0004185|GO:0006508
Lele31g0219 512 PRINTS Carboxypeptidase C serine protease (S10) family signature 473 486 IPR001563 GO:0004185|GO:0006508
Lele31g0219 512 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 90 489 IPR001563 GO:0004185|GO:0006508
Lele31g0219 512 Coils Coil 309 329 - -
Lele31g0219 512 Gene3D - 408 503 - -
Lele31g0219 512 FunFam Carboxypeptidase 359 506 - -
Lele31g0219 512 FunFam Carboxypeptidase 85 345 - -
Lele31g0219 512 ProSitePatterns Serine carboxypeptidases, histidine active site. 473 490 IPR033124 GO:0004185
Lele31g0219 512 SUPERFAMILY alpha/beta-Hydrolases 94 506 IPR029058 -
Lele31g0219 512 ProSitePatterns Serine carboxypeptidases, serine active site. 234 241 IPR018202 GO:0004185
Lele31g0219 512 Pfam Serine carboxypeptidase 96 503 IPR001563 GO:0004185|GO:0006508
Lele31g0219 512 FunFam Carboxypeptidase 408 503 - -
Lele31g0219 512 Gene3D - 362 398 - -
Lele31g0219 512 Gene3D alpha/beta hydrolase 85 345 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0219 Lele-ChrLele31 2226710 2232232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0219 370 506 Calmodulin-binding Proteins AT2G22960 33.577 1.19e-19 85.1