Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0207 ATGAAGAGGTTGAGGTCTAGCGAGGACCTCCATTCGTACGGAGACAAAAATGGCTGCAAGGATTCGAATCTGAATCGATCCTCGTCTTCTTCAAACCGAACCTTTTACTACAAACCTGATAATGTGCGGAAGGGATTGCTTTCCTCATCATCTTCGGCGTCTCGGTATGACAGGGATCGAACGATGGAGGAGGATCGGGAAGGCTCCCGCTTGGTTCGGAAGCGATCGGACCATGATTTTGATAGTTTTGATCGCAGAAAGGGGTTTGATCGTTACAGGGACACTGGAGATAATCGAGGATACGGAGCTGGAGGGGATAGGGGTTTGATTCAGAGGTCGGAGAGTTTTTGCGGGTCTAGGAGGGATTTTCCGAAGGGCTTTCGGTCTGAGAGGGACCGGTCTCGGCGAGAAGGCAGTGTGTCCTCGTGGCGGAGATTTGGTGGTGGGTTAAAGGATTTTGATGATAGTGGCAGGGGTAGCAGGGTTGGACTGGACGATAGAGTAGTGCGGTCTCCGAAGAATTTGAGGGATGTAAAATCCCCGACACGCTCAAAAGATTCAGAGAGCGAGCATTCTAAGATGAGTGAGCAGTCTAAGATGAGGTCTTCTTCAAGAGGGTCCAGAGATGCAAAGTCGAAGTCCAAGTCTCCATCTTGGTCCAAGGATTCAGAGAGTGAACAATCAAGGAGTGAGCAATCGAAGAGTGTTGAGGTGAAGAAAACTGAGGAAGTGCAGGTTGAGAGCCGTAGTAGTAGTGAAATGGAAGAAGGAGAATTGGAGCCAGAAGCCATGCCTGAAACAGAACCAGAAAAGGCTTCTAATGCTGCACCTAAGAATGAGGACCAGACCTCTATTCCTTTGGACGCCGATGATAAGGAAATCCAGACTGAAAGCCAGCTCAATGATACAGATACTATTATGCATGAAATACCCGACGCGTTAAATAAAGAAGAGTCAAAACCAGAAGAGGGTACCAAGTCAGCAGAACAGAATGTGGAGAAAGATGATAAGCTGCCAGATGTTCAGAATGATCCAACTGATAAAGTGCATGATACAGAAAATGAAATTGAAACTTCTGTTCATAATGATAACAAGGCTGAAGGGAGTCGGAAAGTCGAAATTGCATGTAAGGGAGAAACAAAGGAAGGTGCGGAGCAAGAGAAACCATTGCTTCATGAAGAGGAACTTAAGCAGCAAGGGAAACCATTGCTTCATGAAGAGGAACATAAGCAGGAGAAGGGTGTAGATCTTGAAACCAGGGCAGACTCTGACAAACCAGAGCCACACAAGGACGTTTCAACAGAAAATGAAGTGCTTAAAACTGATGGGGAAATAACGATGGAGACTGTGACCAACAACGCGAGGGATAGAGTCAAAAGTGTATCTGTGACTCCTACTGATGTTGTTCATCCTTCTGAAGATGTTTTGTGGAATGACGGAGGACCCAGAGATCTCACAACATGCTCTGGCGATGCCATGGAAGGTCCAAACACAAGGGGCTTTGAGTTGTTTTCCAGATCTCCTGTTAGGAAAGCAAAGAAAACGGACCAATCAAGTCTCAGCAAACATAAGGATGAAAGTCTTTCAATGGAGGATCTTGATCTTTCTCTTAGCTTGCCTAATGTTTTGTTACCTATTGGTGCTAATGAGAATACACCAGACCCTGGATCCCCCAGTCAAGCTCGAAGTGTACAGTCTTTAAGTACATTTCGTACAAACTCAGAAGGATTTACTGCGTCAATGTCTTTCTCAGGTTCCCAATCTTTTTATCACAATCCAAGCTGTTCTCTCACGCAAAATTCAATCGACTTTGAACAATCTGTTCATAGTCGCCCATTATTTCAGGGAATAGATCAAGTTTCTCATGGAGGCTGGCAAGGTCAGTCTCAGACTGATCCCAAACAGAAAGAAATTCCTTACTGTCAAGAAACTTTGGTTAATGGCAGTGGCACTTTTTGTCAGTCTCAAGCAGCATGGGGCATTTTGGAGGGTCAAGCTGTGAAAGGTCAGCCTTCTAGGATTCTCGAAGGTAGCTCAAAAGTGGCCAGTGGACTTGACAGGCAGTTGAGTTGTCATAAGCAGCTGTCAGGACAGTCAAGGCGTCATGATGATGTTAGATCTCCTTCACAGAGTGTTGGTTCTCATGACATTGGGTCAAGTTATAGTTTTGACAAGAAGAGAGAAATGAGAGACAGGAGTAATGGTAGTTTATATAGAACTGCGAGCCACAAGGAACATGAGCAATTTCAGATGGGTGGACTTGAGTTTGTTGAGACTATCATTGCAAAAATAGTTTCTGAACCAGTGCCTGCAATGGCTAAGAAGTTTCATGAAATGGCTGGACAGACTTTGTCATGCTTGAAAGAGAGCATTCGTGAGATTATGCTTAATGCAGATAAGCGTGGGCAAATACTTGCTTTTCAGAAAGTTATGCAGAACAGGTCTGATATAACCTTGGAGGTTTTACTAAAGGCCCACAGAGTTCAATTGGAAATTTTGGTTGCTTTGAAACAAGATTTAACTAATTTTATTCGGTTAGACAACAGCATTTCGTCTACTGATTTAGCTGAGATTTTTCTGAACTTAAGATGTAGGAATCTTTTATGCCGGAGTCAGTTGCCTGTGGATGAATGTGATTGCAAAGTTTGTGCACAGAAAAGTGGCTTTTGCAGGGAATGCATGTGCCTTGTGTGTTCTAAGTTTGACAATGCATCAAATACATGTAGTTGGGTCGGGTGCGATGTTTGCCTTCATTGGTGCCATACAGACTGTGGATTACGTGAATCATATATTAGAAATGGACACAGTGCTACTGGGGTACAAGGGGTAACTGAGATGCAATTTCATTGTATTGCCTGTGATCATCCTTCAGAGATGTTTGGTTTTGTCAAGGAAGTGTTTCTAAATTTTGCAAAAGATTGGTCAGTTGAAGCTCTTCGCAAGGAGCTTGAATATGTGAAGAGAATATTTTCTGCCAGCAAAGACATGAGAGGGAGACGGCTTCATGAGGTTGCTGATCAAATGCTTCTAAGGTTGTCAAATAAGTCTAACCTTCAAGAGGTTTATAGCCACATCATGTCTTTCCTAAATGATGGAGATTCTTCCAAATTAGCCTTGACACATAACTTTCCCGAGAAGGAACAGATTAAAGAAAAGAATGCAGTTGCTGAGCCCAGCCATGAAGCTGCCTGGATGAAATCTATCTATTCCGAAAAGACGCCTCTGTTAGAACGGCCGGCAAACATCCGTTCAAGCTATGACCGGAATGATAAACGGGCTCTACCACAAGAGTTGCAGATGAATGTCCAAAAGGACTATGGTTTTGATGAATTGGAGAGTACAATAAAAATTAAACTGGCAGAGGCTAGAATGTTTCAAACACGCGCGGATGACGCCAGAAGAGAAGCTGAAGGCCTGAAACGCATTGCCCTTGCAAAGAATGAGAAGATTGAAGAGGAGTATGCAAGTCGACTCTCGAAGTTGCGATTGGCAGAGACTGAGGAAATGCGTAAACAAAAATTCGAAGAACACCAGGCATTGGAAAGAGCGCATCTGGAGTACTTTAACATGAAAATGAGAATGGAAGCAGACATTAAGGATCTGCTATTGAAAATGGAAGCGACCAAAAGGAGTCTTGCCATGTGA 3645 0.4379 MKRLRSSEDLHSYGDKNGCKDSNLNRSSSSSNRTFYYKPDNVRKGLLSSSSSASRYDRDRTMEEDREGSRLVRKRSDHDFDSFDRRKGFDRYRDTGDNRGYGAGGDRGLIQRSESFCGSRRDFPKGFRSERDRSRREGSVSSWRRFGGGLKDFDDSGRGSRVGLDDRVVRSPKNLRDVKSPTRSKDSESEHSKMSEQSKMRSSSRGSRDAKSKSKSPSWSKDSESEQSRSEQSKSVEVKKTEEVQVESRSSSEMEEGELEPEAMPETEPEKASNAAPKNEDQTSIPLDADDKEIQTESQLNDTDTIMHEIPDALNKEESKPEEGTKSAEQNVEKDDKLPDVQNDPTDKVHDTENEIETSVHNDNKAEGSRKVEIACKGETKEGAEQEKPLLHEEELKQQGKPLLHEEEHKQEKGVDLETRADSDKPEPHKDVSTENEVLKTDGEITMETVTNNARDRVKSVSVTPTDVVHPSEDVLWNDGGPRDLTTCSGDAMEGPNTRGFELFSRSPVRKAKKTDQSSLSKHKDESLSMEDLDLSLSLPNVLLPIGANENTPDPGSPSQARSVQSLSTFRTNSEGFTASMSFSGSQSFYHNPSCSLTQNSIDFEQSVHSRPLFQGIDQVSHGGWQGQSQTDPKQKEIPYCQETLVNGSGTFCQSQAAWGILEGQAVKGQPSRILEGSSKVASGLDRQLSCHKQLSGQSRRHDDVRSPSQSVGSHDIGSSYSFDKKREMRDRSNGSLYRTASHKEHEQFQMGGLEFVETIIAKIVSEPVPAMAKKFHEMAGQTLSCLKESIREIMLNADKRGQILAFQKVMQNRSDITLEVLLKAHRVQLEILVALKQDLTNFIRLDNSISSTDLAEIFLNLRCRNLLCRSQLPVDECDCKVCAQKSGFCRECMCLVCSKFDNASNTCSWVGCDVCLHWCHTDCGLRESYIRNGHSATGVQGVTEMQFHCIACDHPSEMFGFVKEVFLNFAKDWSVEALRKELEYVKRIFSASKDMRGRRLHEVADQMLLRLSNKSNLQEVYSHIMSFLNDGDSSKLALTHNFPEKEQIKEKNAVAEPSHEAAWMKSIYSEKTPLLERPANIRSSYDRNDKRALPQELQMNVQKDYGFDELESTIKIKLAEARMFQTRADDARREAEGLKRIALAKNEKIEEEYASRLSKLRLAETEEMRKQKFEEHQALERAHLEYFNMKMRMEADIKDLLLKMEATKRSLAM 1214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0207 1214 MobiDBLite consensus disorder prediction 720 734 - -
Lele31g0207 1214 MobiDBLite consensus disorder prediction 118 140 - -
Lele31g0207 1214 MobiDBLite consensus disorder prediction 56 97 - -
Lele31g0207 1214 MobiDBLite consensus disorder prediction 506 529 - -
Lele31g0207 1214 CDD PHD_OBE1_like 894 953 - -
Lele31g0207 1214 MobiDBLite consensus disorder prediction 693 734 - -
Lele31g0207 1214 MobiDBLite consensus disorder prediction 552 567 - -
Lele31g0207 1214 MobiDBLite consensus disorder prediction 1 443 - -
Lele31g0207 1214 MobiDBLite consensus disorder prediction 546 567 - -
Lele31g0207 1214 MobiDBLite consensus disorder prediction 309 442 - -
Lele31g0207 1214 Coils Coil 1133 1153 - -
Lele31g0207 1214 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 1 1212 IPR004082 -
Lele31g0207 1214 MobiDBLite consensus disorder prediction 284 298 - -
Lele31g0207 1214 Pfam Coiled-coil region of Oberon 1086 1202 IPR032535 -
Lele31g0207 1214 MobiDBLite consensus disorder prediction 490 529 - -
Lele31g0207 1214 Pfam PHD - plant homeodomain finger protein 864 987 IPR032881 -
Lele31g0207 1214 MobiDBLite consensus disorder prediction 18 37 - -
Lele31g0207 1214 MobiDBLite consensus disorder prediction 148 256 - -
Lele31g0207 1214 MobiDBLite consensus disorder prediction 1 16 - -
Lele31g0207 1214 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1148 1170 IPR004082 -
Lele31g0207 1214 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 775 797 IPR004082 -
Lele31g0207 1214 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 855 876 IPR004082 -
Lele31g0207 1214 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 901 921 IPR004082 -
Lele31g0207 1214 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 814 829 IPR004082 -
Lele31g0207 1214 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 974 993 IPR004082 -
Lele31g0207 1214 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 829 844 IPR004082 -
Lele31g0207 1214 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1109 1129 IPR004082 -
Lele31g0207 1214 Coils Coil 1191 1211 - -
Lele31g0207 1214 Coils Coil 1163 1183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0207 Lele-ChrLele31 2027068 2031646 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0207 864 1012 PHD Gene Family AT5G57380 26.846 5.27e-11 65.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g1370 29 20451084 20455606 Lele31g0207 31 2027068 2031646 hybridization
Lele30g0186 30 1864891 1869541 Lele31g0207 31 2027068 2031646 hybridization