Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0196 ATGGCTTCACTTCAATGTTTCTTTCAATGGCATAGTTCTCGTGGTTATAAGAATTCTACAAGCCTCAAGATTTGCCCAGATTTATGGGCATTGGCCAGTGCCAAGTCAGTAGCGACTTGTATTATTCTGACCTCTGCCCTAGTTCTAGTTCTTGGTCGTTTTCAGTTTTCTGCACTTGTGCAACGATGGATAATCATGTTTGATGGAGATGGAATGATCCATGGTTTGCGTATCAAAGATGGAAAAGCAACATATGTTTCCCGATTTGTGAAAACATCTCGTCTTAAACAAGAAGAATATTTTGGAGGCTCTAAATTTACGAAGATTGGAGATCTTAAAGGTTTTTTTGGACTTATAATGGTTAGCATGCAAATGCTAAGAGCTAAATTGCAAGTACTAGATATGTCTTATGGACATGGAACAGCTAACACAGCTCTTGTATATCACCATGGGAAGCTTCTAGCACTCTATGAAGCAGATAAACCTTATGCCATTAAAGTTTTTGAAGATGGGGATTTGCAAACTCTTGGCCTACTGGACTATGACAAGAGATTGAACCATCCCTTTACTGCTCATCCAAAAGTTGACCCGTTTACCGATGAGATGTTCACATTTGGCTATTCACATACGCCACCATATATAACTTACAGAGTAATCTCAAAGGACGGATTTATGCATGATCCTGTACCTATAACAATATCAGAGCCCATCATGATGCATGATTTCGCCATCACAGAGAATTATGCAATATTTATGGATCTTCCTTTGTATTATAGACCCAAGGAAATGGTGAAGGAGAAAAACATGATATTATCATTTGATTCAACCAAAAACGCTCGTTTTGGTGTACTGCCTCGATATGCTAAGAATGAGATGCAAATTAGATGGTTTGAGCTTCCAAACTGCTTCATATTTCACAATGAAAATCAAATTATCAATCTGCATTTAACGTATTTGATGATTATCATTGATCGTTCAAACCTCCTTTATAATCTTTTGTATGAATCTTCTGTTCTAGCTAATGCTTGGGAGGAGGATGAGGAAGTCGTTTTGATAACCTGCCGTCTTGAGAATCCAGATCTGGACATGGTTGGTGGTGGTGTCAAGGAAAAGCTGGATAATTTTTCAAATGAGCTGTATGAAATGAGATTCAACATGAAAACTGGTCTAGCTTCACAGAGAAAACTATCAGCATCTGCTGTAGATTTTCCTAGAGTAAACGAAAGCTATACTGGCAGAAGATCAGCAGTGCATGTCATCGATGCAAAGACAATGTCAGCTGATCCTGTTGCAGTTGTTGAATTGCCACGTAGAGTTCCATATGGTTTCCATGACTTCTTTGTGACTGAGTTCCCAGGCTTTCAAGGATCTGGCAAATCTGCAAAAGCGATTGAAGATAACCTAAGTAATGTTACCTATGATACCCCACTAGGGGAACAACTGCAAGCACAGGCAAAACTGAGTGTTTTAACTTTTAACAGAAGATAA 1488 0.3864 MASLQCFFQWHSSRGYKNSTSLKICPDLWALASAKSVATCIILTSALVLVLGRFQFSALVQRWIIMFDGDGMIHGLRIKDGKATYVSRFVKTSRLKQEEYFGGSKFTKIGDLKGFFGLIMVSMQMLRAKLQVLDMSYGHGTANTALVYHHGKLLALYEADKPYAIKVFEDGDLQTLGLLDYDKRLNHPFTAHPKVDPFTDEMFTFGYSHTPPYITYRVISKDGFMHDPVPITISEPIMMHDFAITENYAIFMDLPLYYRPKEMVKEKNMILSFDSTKNARFGVLPRYAKNEMQIRWFELPNCFIFHNENQIINLHLTYLMIIIDRSNLLYNLLYESSVLANAWEEDEEVVLITCRLENPDLDMVGGGVKEKLDNFSNELYEMRFNMKTGLASQRKLSASAVDFPRVNESYTGRRSAVHVIDAKTMSADPVAVVELPRRVPYGFHDFFVTEFPGFQGSGKSAKAIEDNLSNVTYDTPLGEQLQAQAKLSVLTFNRR 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0196 495 PANTHER BETA-CAROTENE DIOXYGENASE 339 414 IPR004294 GO:0016702
Lele31g0196 495 Pfam Retinal pigment epithelial membrane protein 340 415 IPR004294 GO:0016702
Lele31g0196 495 Pfam Retinal pigment epithelial membrane protein 66 309 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0196 Lele-ChrLele31 1933776 1941325 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g1381 29 20527953 20533765 Lele31g0196 31 1933776 1941325 hybridization
Lele30g0177 30 1787049 1795073 Lele31g0196 31 1933776 1941325 hybridization